myRT

myRT report for GCA_003469115.1_ASM346911v1

Download annotations/find similar RTs

Seq: QSII01000013.1 Parabacteroides merdae strain AM34-17 AM34-17.Scaf13, whole genome shotgun sequence (112277 bp)
Overview 1 RT 1: 108900-112095 bp Neighborhood of RT #1 [108900, 112095] RVT-GII Intron_maturas2 Feature: gene Location: 108900-109091 bp Feature: gene Location: 109098-109484 bp Feature: gene Location: 109854-111662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110118-110940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 01 1 8-1 1 0940 bp Feature: domain Description: Intron_maturas2 Location: 111009-111318 bp Feature: domain Description: Intron_maturas2 Location: 1 1 1 009-1 1 1 31 8 bp Feature: gene Location: 111664-111846 bp Feature: gene Location: 111952-112095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: QSII01000033.1 Parabacteroides merdae strain AM34-17 AM34-17.Scaf33, whole genome shotgun sequence (40832 bp)
Overview 1 RT 1: 23512-32978 bp Neighborhood of RT #1 [23512, 34183] DUF4065 N6_Mtase COG4646 RVT_N RVT-GII GIIM KAP_NTPase KAP_NTPase Feature: gene Location: 23512-24069 bp Feature: domain Description: DUF4065 Location: 23602-23929 bp Feature: domain Description: DUF4065 Location: 2 3602 -2 392 9 bp Feature: gene Location: 24608-28645 bp Feature: domain Description: N6_Mtase Location: 25100-25514 bp Feature: domain Description: N6_Mtase Location: 2 5100-2 5514 bp Feature: domain Description: COG4646 Location: 26297-28040 bp Feature: domain Description: COG4646 Location: 2 62 97-2 8040 bp Feature: gene Location: 29303-30976 bp Feature: RT Description: RVT_N Location: 29357-29600 bp Feature: RT Description: RVT_N Location: 2 9357-2 9600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29645-30293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9645-302 93 bp Feature: domain Description: GIIM Note: maturase Location: 30347-30578 bp Feature: domain Description: GIIM Note: maturase Location: 30347-30578 bp Feature: gene Location: 30973-32052 bp Feature: gene Location: 32294-34183 bp Feature: domain Description: KAP_NTPase Location: 32342-32432 bp Feature: domain Description: KAP_NTPase Location: 32 342 -32 432 bp Feature: domain Description: KAP_NTPase Location: 32702-32978 bp Feature: domain Description: KAP_NTPase Location: 32 702 -32 978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4065 (pfam13274), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), KAP_NTPase (pfam07693)

Seq: QSII01000046.1 Parabacteroides merdae strain AM34-17 AM34-17.Scaf46, whole genome shotgun sequence (17207 bp)
Overview 1 RT 1: 11288-16833 bp Neighborhood of RT #1 [11288, 17126] Relaxase RVT-GII Intron_maturas2 HNHc Relaxase YWFCY TraG-D_C Feature: gene Location: 11288-11635 bp Feature: domain Description: Relaxase Location: 11315-11612 bp Feature: domain Description: Relaxase Location: 113 15-11612 bp Feature: gene Location: 11740-12237 bp Feature: gene Location: 12250-14055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12514-13333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12514-13 3 3 3 bp Feature: domain Description: Intron_maturas2 Location: 13495-13765 bp Feature: domain Description: Intron_maturas2 Location: 13 495-13 765 bp Feature: domain Description: HNHc Note: nucleases Location: 13876-14026 bp Feature: domain Description: HNHc Note: nucleases Location: 13 876-14026 bp Feature: gene Location: 14022-15089 bp Feature: domain Description: Relaxase Location: 14160-14394 bp Feature: domain Description: Relaxase Location: 14160-143 94 bp Feature: gene Location: 15120-17126 bp Feature: domain Description: YWFCY Location: 15129-15303 bp Feature: domain Description: YWFCY Location: 15129-153 03 bp Feature: domain Description: TraG-D_C Location: 16503-16833 bp Feature: domain Description: TraG-D_C Location: 16503 -1683 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), YWFCY (pfam14293), TraG-D_C (pfam12696)