myRT

myRT report for GCA_003469595.1_ASM346959v1

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Seq: QSKS01000001.1 Bacteroides intestinalis strain AM27-2 AM27-2.Scaf1, whole genome shotgun sequence (1141157 bp)
Overview 1 RT 1: 193998-198507 bp Neighborhood of RT #1 [193998, 198512] HptA MFS_DtpA_like RVT-Retrons COG1237 Feature: gene Location: 193998-194534 bp Feature: domain Description: HptA Location: 194016-194526 bp Feature: domain Description: HptA Location: 1 9401 6-1 94526 bp Feature: gene Location: 194574-196112 bp Feature: domain Description: MFS_DtpA_like Location: 194595-196083 bp Feature: domain Description: MFS_DtpA_like Location: 1 94595-1 96083 bp Feature: gene Location: 196384-197505 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 196696-197248 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 96696-1 97248 bp Feature: gene Location: 198042-198278 bp Feature: gene Location: 198381-198512 bp Feature: domain Description: COG1237 Location: 198402-198507 bp Feature: domain Description: COG1 237 Location: 1 98402-1 98507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HptA (COG0634), MFS_DtpA_like (cd17346), RVT-Retrons, COG1237 (Metal-dependent hydrolase, beta-lactamase superfamily II )

Seq: QSKS01000007.1 Bacteroides intestinalis strain AM27-2 AM27-2.Scaf7, whole genome shotgun sequence (247092 bp)
Overview 1 RT 1: 207990-215808 bp Neighborhood of RT #1 [207990, 216065] DDE_Tnp_1_6 RVT-UG8 RVT-UG3 DUF2971 Feature: gene Location: 207990-208232 bp Feature: gene Location: 208937-209422 bp Feature: domain Description: DDE_Tnp_1_6 Location: 208955-209294 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2 08955-2 092 94 bp Feature: gene Location: 209832-212024 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 210447-210897 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 10447-2 10897 bp Feature: gene Location: 212011-213474 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 212461-212974 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2 12 461-2 12 974 bp Feature: gene Location: 213889-214803 bp Feature: gene Location: 215220-216065 bp Feature: domain Description: DUF2971 Location: 215604-215808 bp Feature: domain Description: DUF2 971 Location: 2 15604-2 15808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_6 (pfam13751), RVT-UG8, RVT-UG3, DUF2971 (pfam11185)