myRT

myRT report for GCA_003469655.1_ASM346965v1

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Seq: QSKZ01000002.1 Bacteroides salyersiae strain AM26-2AC AM26-2AC.Scaf2, whole genome shotgun sequence (753422 bp)
Overview 1 RT 1: 351665-356903 bp Neighborhood of RT #1 [351665, 356926] RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cas_Cmr5 Feature: gene Location: 351665-351811 bp Feature: gene Location: 351818-352057 bp Feature: gene Location: 353413-355686 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 353623-354226 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 353623-354226 bp Feature: domain Description: Cas1_I-II-III Location: 354688-355648 bp Feature: domain Description: Cas1 _I-II-III Location: 354688-355648 bp Feature: gene Location: 355719-356507 bp Feature: domain Description: Cmr6_III-B Location: 355797-356496 bp Feature: domain Description: Cmr6_III-B Location: 355797-356496 bp Feature: gene Location: 356504-356926 bp Feature: domain Description: Cas_Cmr5 Location: 356576-356903 bp Feature: domain Description: Cas_Cmr5 Location: 356576-356903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701)

Seq: QSKZ01000026.1 Bacteroides salyersiae strain AM26-2AC AM26-2AC.Scaf26, whole genome shotgun sequence (6963 bp)
Overview 1 RT 1: 1237-6577 bp Neighborhood of RT #1 [1237, 6960] RVT_N RVT-GII YkfC COG4646 Feature: gene Location: 1237-1377 bp Feature: gene Location: 1582-2895 bp Feature: gene Location: 2849-4585 bp Feature: domain Description: RVT_N Location: 2972-3215 bp Feature: domain Description: RVT_N Location: 2 972 -32 15 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3260-3908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 60-3908 bp Feature: domain Description: YkfC Location: 4118-4208 bp Feature: domain Description: YkfC Location: 4118-42 08 bp Feature: gene Location: 5191-6960 bp Feature: domain Description: COG4646 Location: 5197-6577 bp Feature: domain Description: COG4646 Location: 5197-6577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), COG4646 (Adenine-specific DNA methylase, N12 class )