myRT

myRT report for GCA_003469815.1_ASM346981v1

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Seq: QSKE01000136.1 Eubacterium sp. AM28-29 AM28-29.Scaf136, whole genome shotgun sequence (2305 bp)
Overview 1 RT 1: 413-2095 bp Neighborhood of RT #1 [413, 2202] RVT-GII GIIM Feature: gene Location: 413-547 bp Feature: gene Location: 864-992 bp Feature: gene Location: 1471-2202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1474-1822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 474-1 822 bp Feature: domain Description: GIIM Note: maturase Location: 1891-2095 bp Feature: domain Description: GIIM Note: maturase Location: 1 891 -2095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QSKE01000139.1 Eubacterium sp. AM28-29 AM28-29.Scaf139, whole genome shotgun sequence (2156 bp)
Overview 1 RT 1: 124-1156 bp Neighborhood of RT #1 [124, 1524] RVT-GII GIIM Feature: gene Location: 124-1524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352 -973 bp Feature: domain Description: GIIM Note: maturase Location: 1045-1156 bp Feature: domain Description: GIIM Note: maturase Location: 1045-1156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QSKE01000147.1 Eubacterium sp. AM28-29 AM28-29.Scaf147, whole genome shotgun sequence (1840 bp)
Overview 1 RT 1: 43-1839 bp Neighborhood of RT #1 [43, 1839] RVT-GII GIIM Feature: gene Location: 43-1323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-874 bp Feature: domain Description: GIIM Note: maturase Location: 937-1150 bp Feature: domain Description: GIIM Note: maturase Location: 93 7-1150 bp Feature: gene Location: 1642-1839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QSKE01000183.1 Eubacterium sp. AM28-29 AM28-29.Scaf183, whole genome shotgun sequence (774 bp)
Overview 1 RT 1: 1-559 bp Neighborhood of RT #1 [1, 564] RVT-GII group_II_RT_mat Feature: gene Location: 1-387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25-388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25-388 bp Feature: gene Location: 397-564 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 427-559 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4 27-559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)

Seq: QSKE01000191.1 Eubacterium sp. AM28-29 AM28-29.Scaf191, whole genome shotgun sequence (593 bp)
Overview 1 RT 1: 115-592 bp Neighborhood of RT #1 [115, 591] group_II_RT_mat RVT-GII Feature: gene Location: 115-591 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 145-331 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 145 -331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 388-592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 388-5 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII

Seq: QSKE01000044.1 Eubacterium sp. AM28-29 AM28-29.Scaf44, whole genome shotgun sequence (20868 bp)
Overview 1 RT 1: 1-2324 bp Neighborhood of RT #1 [1, 2332] RVT-GII GIIM DUF454 Feature: gene Location: 1-747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 169-742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16 9-742 bp Feature: gene Location: 929-1147 bp Feature: domain Description: GIIM Note: maturase Location: 932-1064 bp Feature: domain Description: GIIM Note: maturase Location: 932-106 4 bp Feature: gene Location: 1925-2332 bp Feature: domain Description: DUF454 Location: 1985-2324 bp Feature: domain Description: DUF454 Location: 1985-2324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF454 (pfam04304), GIIM (pfam08388)

Seq: QSKE01000006.1 Eubacterium sp. AM28-29 AM28-29.Scaf6, whole genome shotgun sequence (64254 bp)
Overview 1 RT 1: 37756-43670 bp Neighborhood of RT #1 [37756, 43678] ruvB RVT-GII HNHc recJ PRK02304 Feature: gene Location: 37756-38766 bp Feature: domain Description: ruvB Location: 37792-38737 bp Feature: domain Description: ruvB Location: 37 7 92-387 37 bp Feature: gene Location: 38806-39018 bp Feature: gene Location: 39777-41660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40089-40827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40089-40827 bp Feature: domain Description: HNHc Note: nucleases Location: 41427-41529 bp Feature: domain Description: HNHc Note: nucleases Location: 41427 -41529 bp Feature: gene Location: 41734-43125 bp Feature: domain Description: recJ Location: 41773-43114 bp Feature: domain Description: recJ Location: 417 7 3-43114 bp Feature: gene Location: 43157-43678 bp Feature: domain Description: PRK02304 Location: 43160-43670 bp Feature: domain Description: PRK02304 Location: 43160-4367 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ruvB (TIGR00635), RVT-GII, HNHc (smart00507), recJ (TIGR00644), PRK02304 (adenine phosphoribosyltransferase; Provisional)