myRT

myRT report for GCA_003469845.1_ASM346984v1

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Seq: QSKF01000014.1 Blautia obeum strain AM28-23 AM28-23.Scaf14, whole genome shotgun sequence (94395 bp)
Overview 1 RT 1: 18447-30959 bp Neighborhood of RT #1 [18447, 31222] RadC COG4646 HELICc RVT_N RVT-GII GIIM YodL DUF4316 LPD25 Feature: gene Location: 18447-19109 bp Feature: domain Description: RadC Location: 18528-18882 bp Feature: domain Description: RadC Location: 1 8528-1 8882 bp Feature: gene Location: 19187-25516 bp Feature: domain Description: COG4646 Location: 22451-25019 bp Feature: domain Description: COG4646 Location: 22451 -2501 9 bp Feature: domain Description: HELICc Location: 25076-25439 bp Feature: domain Description: HELICc Location: 25076-25439 bp Feature: gene Location: 26095-27765 bp Feature: RT Description: RVT_N Location: 26140-26383 bp Feature: RT Description: RVT_N Location: 261 40-26383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26428-27076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26428-27076 bp Feature: domain Description: GIIM Note: maturase Location: 27130-27361 bp Feature: domain Description: GIIM Note: maturase Location: 271 30-27361 bp Feature: gene Location: 27766-28737 bp Feature: gene Location: 28799-31222 bp Feature: domain Description: YodL Location: 29576-29870 bp Feature: domain Description: YodL Location: 29576-29870 bp Feature: domain Description: DUF4316 Location: 29933-30026 bp Feature: domain Description: DUF431 6 Location: 29933-30026 bp Feature: domain Description: LPD25 Location: 30683-30959 bp Feature: domain Description: LPD25 Location: 30683-30959 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RadC (pfam04002), COG4646 (Adenine-specific DNA methylase, N12 class ), HELICc (smart00490), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), YodL (pfam14191), DUF4316 (pfam14195), LPD25 (pfam18840)