myRT

myRT report for GCA_003470035.1_ASM347003v1

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Seq: QSKW01000001.1 Roseburia inulinivorans strain AM27-11 AM27-11.Scaf1, whole genome shotgun sequence (303610 bp)
Overview 1 RT 1: 259327-263140 bp Neighborhood of RT #1 [259327, 263140] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 259327-259503 bp Feature: gene Location: 259685-259987 bp Feature: gene Location: 260063-261895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260327-261158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260327-261 1 58 bp Feature: domain Description: Intron_maturas2 Location: 261233-261545 bp Feature: domain Description: Intron_maturas2 Location: 261 233-261 545 bp Feature: domain Description: HNHc Note: nucleases Location: 261692-261866 bp Feature: domain Description: HNHc Note: nucleases Location: 261 692-261 866 bp Feature: gene Location: 262121-262354 bp Feature: gene Location: 262469-263140 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: QSKW01000002.1 Roseburia inulinivorans strain AM27-11 AM27-11.Scaf2, whole genome shotgun sequence (240944 bp)
Overview 1 RT 1: 102-1758 bp Neighborhood of RT #1 [102, 1758] RVT-GII GIIM Feature: gene Location: 102-848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105-483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105-483 bp Feature: domain Description: GIIM Note: maturase Location: 564-789 bp Feature: domain Description: GIIM Note: maturase Location: 564-789 bp Feature: gene Location: 1336-1464 bp Feature: gene Location: 1612-1758 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QSKW01000050.1 Roseburia inulinivorans strain AM27-11 AM27-11.Scaf50, whole genome shotgun sequence (13199 bp)
Overview 1 RT 1: 9217-12758 bp Neighborhood of RT #1 [9217, 13108] SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 RVT-GII Feature: gene Location: 9217-11073 bp Feature: domain Description: SR_TndX_transposase Location: 9259-9673 bp Feature: domain Description: SR_TndX_transposase Location: 9259-9673 bp Feature: domain Description: Recombinase Location: 9778-10153 bp Feature: domain Description: Recombinase Location: 9778-10153 bp Feature: domain Description: Zn_ribbon_recom Location: 10192-10384 bp Feature: domain Description: Zn_ribbon_recom Location: 10192-103 84 bp Feature: domain Description: DUF4368 Location: 10660-10858 bp Feature: domain Description: DUF43 68 Location: 10660-10858 bp Feature: gene Location: 11478-11723 bp Feature: gene Location: 11813-13108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12068-12758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12068-12758 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287)

Seq: QSKW01000067.1 Roseburia inulinivorans strain AM27-11 AM27-11.Scaf67, whole genome shotgun sequence (5989 bp)
Overview 1 RT 1: 363-3083 bp Neighborhood of RT #1 [363, 3100] RVT-GII GIIM RAYT DUF772 Feature: gene Location: 363-506 bp Feature: gene Location: 493-1776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 703-1318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 703-1318 bp Feature: domain Description: GIIM Note: maturase Location: 1378-1606 bp Feature: domain Description: GIIM Note: maturase Location: 1378-1606 bp Feature: gene Location: 2242-2568 bp Feature: domain Description: RAYT Location: 2248-2509 bp Feature: domain Description: RAYT Location: 224 8-2509 bp Feature: gene Location: 2774-3100 bp Feature: domain Description: DUF772 Location: 2960-3083 bp Feature: domain Description: DUF772 Location: 2960-3083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RAYT (COG1943), DUF772 (pfam05598), RVT-GII, GIIM (pfam08388)