myRT

myRT report for GCA_003470775.1_ASM347077v1

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Seq: QRHG01000066.1 Ruminococcus lactaris strain AM25-1LB AM25-1LB.Scaf66, whole genome shotgun sequence (7822 bp)
Overview 1 RT 1: 553-6376 bp Neighborhood of RT #1 [553, 6444] SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 VirD4 RVT-GII T4SS-DNA_transf DUF4314 Feature: gene Location: 553-2433 bp Feature: domain Description: SR_TndX_transposase Location: 577-985 bp Feature: domain Description: SR_TndX_transposase Location: 577-985 bp Feature: domain Description: Recombinase Location: 1084-1447 bp Feature: domain Description: Recombinase Location: 1 084-1 447 bp Feature: domain Description: Zn_ribbon_recom Location: 1489-1672 bp Feature: domain Description: Zn_ribbon_recom Location: 1 489-1 672 bp Feature: domain Description: DUF4368 Location: 1957-2143 bp Feature: domain Description: DUF4368 Location: 1 957-21 43 bp Feature: gene Location: 2506-2904 bp Feature: domain Description: VirD4 Location: 2515-2770 bp Feature: domain Description: VirD4 Location: 251 5-2770 bp Feature: gene Location: 3062-4867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3320-4037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3320-4037 bp Feature: gene Location: 5606-6133 bp Feature: domain Description: T4SS-DNA_transf Location: 5882-6071 bp Feature: domain Description: T4SS-DNA_transf Location: 5882-6071 bp Feature: gene Location: 6166-6444 bp Feature: domain Description: DUF4314 Location: 6184-6376 bp Feature: domain Description: DUF431 4 Location: 61 84-6376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), RVT-GII, SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287), DUF4314 (pfam14192)