myRT

myRT report for GCA_003470975.1_ASM347097v1

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Seq: QRHY01000001.1 Tyzzerella nexilis strain AM23-10LB AM23-10LB.Scaf1, whole genome shotgun sequence (747130 bp)
Overview 1 RT 1: 312642-317653 bp Neighborhood of RT #1 [312642, 317856] truA YjiL RVT-Retrons PRK07726 Feature: gene Location: 312642-313379 bp Feature: domain Description: truA Location: 312645-313374 bp Feature: domain Description: truA Location: 31 2645-31 3374 bp Feature: gene Location: 313405-314163 bp Feature: domain Description: YjiL Location: 313411-314158 bp Feature: domain Description: YjiL Location: 31 341 1 -31 41 58 bp Feature: gene Location: 314398-315399 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 314563-315118 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 4563-31 51 1 8 bp Feature: gene Location: 315396-315653 bp Feature: gene Location: 315676-317856 bp Feature: domain Description: PRK07726 Location: 315682-317653 bp Feature: domain Description: PRK07726 Location: 31 5682-31 7653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT truA (PRK00021), YjiL (COG1924), RVT-Retrons, PRK07726 (DNA topoisomerase 3)

Seq: QRHY01000027.1 Tyzzerella nexilis strain AM23-10LB AM23-10LB.Scaf27, whole genome shotgun sequence (8711 bp)
Overview 1 RT 1: 6625-8302 bp Neighborhood of RT #1 [6625, 8652] MobA_MobL RVT-GII Feature: gene Location: 6625-6984 bp Feature: domain Description: MobA_MobL Location: 6676-6892 bp Feature: domain Description: MobA_MobL Location: 6676-6892 bp Feature: gene Location: 7095-7259 bp Feature: gene Location: 7357-8652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7612-8302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7612 -8302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobA_MobL (pfam03389), RVT-GII

Seq: QRHY01000030.1 Tyzzerella nexilis strain AM23-10LB AM23-10LB.Scaf30, whole genome shotgun sequence (6835 bp)
Overview 1 RT 1: 3124-6643 bp Neighborhood of RT #1 [3124, 6756] RVT-GII DUF4274 Feature: gene Location: 3124-3687 bp Feature: gene Location: 3768-4514 bp Feature: gene Location: 4640-5935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4895-5585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4895-5585 bp Feature: gene Location: 6049-6198 bp Feature: gene Location: 6427-6756 bp Feature: domain Description: DUF4274 Location: 6460-6643 bp Feature: domain Description: DUF4274 Location: 6460-6643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF4274 (pfam14096)

Seq: QRHY01000006.1 Tyzzerella nexilis strain AM23-10LB AM23-10LB.Scaf6, whole genome shotgun sequence (156644 bp)
Overview 1 RT 1: 72476-77935 bp Neighborhood of RT #1 [72476, 77940] DUF3801 VirD4 VirD4 RVT-GII TraG-D_C Maff2 Feature: gene Location: 72476-72967 bp Feature: domain Description: DUF3801 Location: 72542-72935 bp Feature: domain Description: DUF3801 Location: 7254 2-72935 bp Feature: gene Location: 72964-73869 bp Feature: domain Description: VirD4 Location: 73237-73582 bp Feature: domain Description: VirD4 Location: 73237-73582 bp Feature: domain Description: VirD4 Location: 73678-73831 bp Feature: domain Description: VirD4 Location: 73678-73831 bp Feature: gene Location: 74528-76435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74858-75602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74 858-75602 bp Feature: gene Location: 76579-77601 bp Feature: domain Description: TraG-D_C Location: 77047-77401 bp Feature: domain Description: TraG-D_C Location: 7704 7-774 01 bp Feature: gene Location: 77725-77940 bp Feature: domain Description: Maff2 Location: 77728-77935 bp Feature: domain Description: Maff2 Location: 77728-77935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), VirD4 (COG3505), RVT-GII, TraG-D_C (pfam12696), Maff2 (pfam12750)

Seq: QRHY01000007.1 Tyzzerella nexilis strain AM23-10LB AM23-10LB.Scaf7, whole genome shotgun sequence (151286 bp)
Overview 1 RT 1: 94532-98767 bp Neighborhood of RT #1 [94532, 99003] Acetyltransf_1 RVT-GII Aes Feature: gene Location: 94532-94963 bp Feature: domain Description: Acetyltransf_1 Location: 94673-94895 bp Feature: domain Description: Acetyltransf_1 Location: 94673-94895 bp Feature: gene Location: 95160-95405 bp Feature: gene Location: 95495-96790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95750-96440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95 75 0-96440 bp Feature: gene Location: 97353-98009 bp Feature: gene Location: 98026-99003 bp Feature: domain Description: Aes Location: 98122-98767 bp Feature: domain Description: Aes Location: 98122-98767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), RVT-GII, Aes (COG0657)