myRT

myRT report for GCA_003471165.1_ASM347116v1

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Seq: QRIL01000023.1 Ruminococcus sp. AM22-13 AM22-13.Scaf23, whole genome shotgun sequence (64096 bp)
Overview 1 RT 1: 7640-10813 bp Neighborhood of RT #1 [7640, 10813] InsQ RVT-GII GIIM Feature: gene Location: 7640-8029 bp Feature: domain Description: InsQ Location: 7655-7979 bp Feature: domain Description: InsQ Location: 7655-7979 bp Feature: gene Location: 8049-8321 bp Feature: gene Location: 8625-9902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8838-9453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8838-9453 bp Feature: domain Description: GIIM Note: maturase Location: 9519-9738 bp Feature: domain Description: GIIM Note: maturase Location: 951 9-9738 bp Feature: gene Location: 10128-10346 bp Feature: gene Location: 10541-10813 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII, GIIM (pfam08388)

Seq: QRIL01000039.1 Ruminococcus sp. AM22-13 AM22-13.Scaf39, whole genome shotgun sequence (25515 bp)
Overview 1 RT 1: 8509-11796 bp Neighborhood of RT #1 [8509, 11796] RVT-GII Feature: gene Location: 8509-8829 bp Feature: gene Location: 9199-9435 bp Feature: gene Location: 9730-10176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9985-10156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9985-10156 bp Feature: gene Location: 10937-11098 bp Feature: gene Location: 11419-11796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QRIL01000040.1 Ruminococcus sp. AM22-13 AM22-13.Scaf40, whole genome shotgun sequence (23753 bp)
Overview 1 RT 1: 7935-11619 bp Neighborhood of RT #1 [7935, 11621] AAA_18 HxlR RVT-GII ManC SalY Feature: gene Location: 7935-8480 bp Feature: domain Description: AAA_18 Location: 7956-8334 bp Feature: domain Description: AAA_18 Location: 7956-83 3 4 bp Feature: gene Location: 8560-8928 bp Feature: domain Description: HxlR Location: 8608-8923 bp Feature: domain Description: HxlR Location: 8608-8923 bp Feature: gene Location: 9037-10443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9427-10090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9427-10090 bp Feature: gene Location: 10831-11289 bp Feature: domain Description: ManC Location: 11059-11254 bp Feature: domain Description: ManC Location: 11059-11254 bp Feature: gene Location: 11391-11621 bp Feature: domain Description: SalY Location: 11418-11619 bp Feature: domain Description: SalY Location: 11418-11619 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_18 (pfam13238), HxlR (pfam01638), RVT-GII, ManC (COG0662), SalY (COG0577)

Seq: QRIL01000054.1 Ruminococcus sp. AM22-13 AM22-13.Scaf54, whole genome shotgun sequence (6618 bp)
Overview 1 RT 1: 3416-5620 bp Neighborhood of RT #1 [3416, 6363] RE_Eco47II RVT-UG12 Feature: gene Location: 3416-3625 bp Feature: domain Description: RE_Eco47II Location: 3425-3548 bp Feature: domain Description: RE_Eco4 7II Location: 34 25-354 8 bp Feature: gene Location: 3646-4512 bp Feature: gene Location: 4666-6363 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 5200-5620 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 5200-5620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RE_Eco47II (pfam09553), RVT-UG12