myRT

myRT report for GCA_003471195.1_ASM347119v1

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Seq: QRIN01000036.1 Prevotella copri strain AM22-1 AM22-1.Scaf36, whole genome shotgun sequence (36544 bp)
Overview 1 RT 1: 31808-36344 bp Neighborhood of RT #1 [31808, 36541] GT4_Bme6-like DEAH_box_HrpB RVT-GII Feature: gene Location: 31808-32581 bp Feature: domain Description: GT4_Bme6-like Location: 31898-32189 bp Feature: domain Description: GT4_Bme6-like Location: 31 898-321 89 bp Feature: gene Location: 32613-35189 bp Feature: domain Description: DEAH_box_HrpB Location: 32652-35184 bp Feature: domain Description: DEAH_box_HrpB Location: 32652-351 84 bp Feature: gene Location: 35573-36541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35726-36344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35726-36344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT4_Bme6-like (cd03821), DEAH_box_HrpB (TIGR01970), RVT-GII

Seq: QRIN01000007.1 Prevotella copri strain AM22-1 AM22-1.Scaf7, whole genome shotgun sequence (83149 bp)
Overview 1 RT 1: 35-2002 bp Neighborhood of RT #1 [35, 2002] RVT-GII GIIM Feature: gene Location: 35-1441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 377-992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 377-992 bp Feature: domain Description: GIIM Note: maturase Location: 1049-1262 bp Feature: domain Description: GIIM Note: maturase Location: 1049-12 62 bp Feature: gene Location: 1537-1842 bp Feature: gene Location: 1793-2002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QRIN01000009.1 Prevotella copri strain AM22-1 AM22-1.Scaf9, whole genome shotgun sequence (79942 bp)
Overview 1 RT 1: 65030-68199 bp Neighborhood of RT #1 [65030, 68199] RVT-UG27 DpnD-PcfM Feature: gene Location: 65030-65176 bp Feature: gene Location: 65502-65639 bp Feature: gene Location: 66362-67627 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 66554-67187 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 66554-67187 bp Feature: gene Location: 67676-67903 bp Feature: domain Description: DpnD-PcfM Location: 67688-67820 bp Feature: domain Description: DpnD-PcfM Location: 67688-67820 bp Feature: gene Location: 67960-68199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27, DpnD-PcfM (pfam14207)