myRT

myRT report for GCA_003471265.1_ASM347126v1

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Seq: QRIS01000026.1 [Ruminococcus] gnavus strain AM21-18 AM21-18.Scaf26, whole genome shotgun sequence (55924 bp)
Overview 1 RT 1: 41847-49130 bp Neighborhood of RT #1 [41847, 49156] PRK10572 DUF4300 RVT-GII GIIM ebgA MelB Feature: gene Location: 41847-42698 bp Feature: domain Description: PRK10572 Location: 41973-42690 bp Feature: domain Description: PRK1 0572 Location: 41 973-42690 bp Feature: gene Location: 42860-43705 bp Feature: domain Description: DUF4300 Location: 42956-43700 bp Feature: domain Description: DUF4300 Location: 42956-43700 bp Feature: gene Location: 43894-44484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43900-43999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43900-43999 bp Feature: domain Description: GIIM Note: maturase Location: 44053-44269 bp Feature: domain Description: GIIM Note: maturase Location: 44053-44269 bp Feature: gene Location: 44705-47770 bp Feature: domain Description: ebgA Location: 44723-47756 bp Feature: domain Description: ebgA Location: 44723-47756 bp Feature: gene Location: 47777-49156 bp Feature: domain Description: MelB Location: 47786-49130 bp Feature: domain Description: MelB Location: 47786-491 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10572 (arabinose operon transcriptional regulator AraC), DUF4300 (pfam14133), RVT-GII, GIIM (pfam08388), ebgA (PRK10340), MelB (COG2211)

Seq: QRIS01000037.1 [Ruminococcus] gnavus strain AM21-18 AM21-18.Scaf37, whole genome shotgun sequence (31683 bp)
Overview 1 RT 1: 14633-21291 bp Neighborhood of RT #1 [14633, 21299] AraC Acetyltransf_1 lant_SP_1948 RVT-GII GIIM Tra8 LanM-like Feature: gene Location: 14633-15487 bp Feature: domain Description: AraC Location: 14663-14963 bp Feature: domain Description: AraC Location: 14663-14963 bp Feature: domain Description: Acetyltransf_1 Location: 15074-15317 bp Feature: domain Description: Acetyltransf_1 Location: 15074-15317 bp Feature: gene Location: 16102-16284 bp Feature: domain Description: lant_SP_1948 Location: 16159-16237 bp Feature: domain Description: lant_SP_1948 Location: 16159-162 37 bp Feature: gene Location: 16823-17293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16826-16967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1682 6-16967 bp Feature: domain Description: GIIM Note: maturase Location: 17039-17225 bp Feature: domain Description: GIIM Note: maturase Location: 17039-172 2 5 bp Feature: gene Location: 17212-17868 bp Feature: domain Description: Tra8 Location: 17326-17773 bp Feature: domain Description: Tra8 Location: 1732 6-17773 bp Feature: gene Location: 18270-21299 bp Feature: domain Description: LanM-like Location: 18726-21291 bp Feature: domain Description: LanM-like Location: 1872 6-2 12 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC (COG2207), Acetyltransf_1 (pfam00583), lant_SP_1948 (TIGR03893), RVT-GII, GIIM (pfam08388), Tra8 (COG2826), LanM-like (cd04792)

Seq: QRIS01000090.1 [Ruminococcus] gnavus strain AM21-18 AM21-18.Scaf90, whole genome shotgun sequence (2716 bp)
Overview 1 RT 1: 779-1778 bp Neighborhood of RT #1 [779, 2605] RVT-GII Feature: gene Location: 779-2605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1079-1778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1079-1778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII