myRT

myRT report for GCA_003471465.1_ASM347146v1

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Seq: QRJE01000041.1 Bacteroides fragilis strain AM18-6 AM18-6.Scaf41, whole genome shotgun sequence (51998 bp)
Overview 1 RT 1: 9562-10984 bp Neighborhood of RT #1 [9562, 10984] HTH_28 RVT-GII Feature: gene Location: 9562-9696 bp Feature: gene Location: 9771-10061 bp Feature: domain Description: HTH_28 Location: 9795-9942 bp Feature: domain Description: HTH_28 Location: 9795-9942 bp Feature: gene Location: 10182-10379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10185-10377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 85-1 0377 bp Feature: gene Location: 10409-10618 bp Feature: gene Location: 10622-10984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_28 (pfam13518)

Seq: QRJE01000006.1 Bacteroides fragilis strain AM18-6 AM18-6.Scaf6, whole genome shotgun sequence (174586 bp)
Overview 1 RT 1: 36696-41315 bp Neighborhood of RT #1 [36696, 41315] DUF1738 RVT-GII Intron_maturas2 MPTase-PolyVal Feature: gene Location: 36696-37199 bp Feature: domain Description: DUF1738 Location: 36750-37167 bp Feature: domain Description: DUF1738 Location: 36750-37167 bp Feature: gene Location: 37375-37632 bp Feature: gene Location: 37763-39574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38027-38849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3802 7-38849 bp Feature: domain Description: Intron_maturas2 Location: 38990-39230 bp Feature: domain Description: Intron_maturas2 Location: 38990-392 30 bp Feature: gene Location: 39576-40889 bp Feature: domain Description: MPTase-PolyVal Location: 39843-40155 bp Feature: domain Description: MPTase-PolyVal Location: 39843-40155 bp Feature: gene Location: 40944-41315 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1738 (pfam08401), RVT-GII, Intron_maturas2 (pfam01348), MPTase-PolyVal (pfam18818)

Seq: QRJE01000007.1 Bacteroides fragilis strain AM18-6 AM18-6.Scaf7, whole genome shotgun sequence (173767 bp)
Overview 1 RT 1: 131258-137796 bp Neighborhood of RT #1 [131258, 137796] RNase_Z rpsA RVT-Retrons Feature: gene Location: 131258-132172 bp Feature: domain Description: RNase_Z Location: 131273-132164 bp Feature: domain Description: RNase_Z Location: 13 1273 -13 2164 bp Feature: gene Location: 132296-134089 bp Feature: domain Description: rpsA Location: 132374-133982 bp Feature: domain Description: rpsA Location: 13 23 74-13 3 982 bp Feature: gene Location: 134231-135346 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 134546-135098 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13 4546-13 5098 bp Feature: gene Location: 135389-135541 bp Feature: gene Location: 135556-137796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_Z (TIGR02651), rpsA (TIGR00717), RVT-Retrons