myRT

myRT report for GCA_003472885.1_ASM347288v1

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Seq: QRNN01000145.1 Prevotella copri strain AF43-2 AF43-2.Scaf145, whole genome shotgun sequence (1935 bp)
Overview 1 RT 1: 206-1649 bp Neighborhood of RT #1 [206, 1828] RVT-GII GIIM Feature: gene Location: 206-376 bp Feature: gene Location: 422-1828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1 382 bp Feature: domain Description: GIIM Note: maturase Location: 1436-1649 bp Feature: domain Description: GIIM Note: maturase Location: 1 436-1 649 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QRNN01000068.1 Prevotella copri strain AF43-2 AF43-2.Scaf68, whole genome shotgun sequence (16936 bp)
Overview 1 RT 1: 8070-16929 bp Neighborhood of RT #1 [8070, 16929] N6_Mtase COG4646 RVT_N RVT-GII YkfC Feature: gene Location: 8070-10583 bp Feature: domain Description: N6_Mtase Location: 8382-9090 bp Feature: domain Description: N6_Mtase Location: 8382 -9090 bp Feature: gene Location: 10694-12823 bp Feature: domain Description: COG4646 Location: 10703-12443 bp Feature: domain Description: COG4646 Location: 10703-12 443 bp Feature: gene Location: 13429-15165 bp Feature: RT Description: RVT_N Location: 13552-13795 bp Feature: RT Description: RVT_N Location: 13552 -13795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13840-14488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13840-14488 bp Feature: domain Description: YkfC Location: 14698-14788 bp Feature: domain Description: YkfC Location: 14698-14788 bp Feature: gene Location: 15119-16321 bp Feature: gene Location: 16777-16929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), N6_Mtase (pfam02384)

Seq: QRNN01000007.1 Prevotella copri strain AF43-2 AF43-2.Scaf7, whole genome shotgun sequence (88356 bp)
Overview 1 RT 1: 42337-44708 bp Neighborhood of RT #1 [42337, 44708] RVT-DGRs Feature: gene Location: 42337-42579 bp Feature: gene Location: 42713-42859 bp Feature: gene Location: 42943-43446 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42949-43420 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42949-43 420 bp Feature: gene Location: 43509-44318 bp Feature: gene Location: 44319-44708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs