myRT

myRT report for GCA_003472985.1_ASM347298v1

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Seq: QRLA01000003.1 Bacteroides eggerthii strain AM14-12 AM14-12.Scaf3, whole genome shotgun sequence (621474 bp)
Overview 1 RT 1: 435711-439944 bp Neighborhood of RT #1 [435711, 440654] dnaG RVT-GII Intron_maturas2 Toprim_2 Mob_Pre Feature: gene Location: 435711-435893 bp Feature: domain Description: dnaG Location: 435780-435879 bp Feature: domain Description: dnaG Location: 435780-435879 bp Feature: gene Location: 436135-436308 bp Feature: gene Location: 436438-438246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 436702-437524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 436702-437524 bp Feature: domain Description: Intron_maturas2 Location: 437602-437905 bp Feature: domain Description: Intron_maturas2 Location: 437602-437905 bp Feature: gene Location: 438236-439123 bp Feature: domain Description: Toprim_2 Location: 438767-439049 bp Feature: domain Description: Toprim_2 Location: 438767-439049 bp Feature: gene Location: 439308-440654 bp Feature: domain Description: Mob_Pre Location: 439314-439944 bp Feature: domain Description: Mob_Pre Location: 43931 4-439944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaG (TIGR01391), RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155), Mob_Pre (pfam01076)

Seq: QRLA01000005.1 Bacteroides eggerthii strain AM14-12 AM14-12.Scaf5, whole genome shotgun sequence (254314 bp)
Overview 1 RT 1: 57891-63039 bp Neighborhood of RT #1 [57891, 63039] YWFCY RVT-GII Intron_maturas2 HNHc TraG-D_C Feature: gene Location: 57891-59054 bp Feature: domain Description: YWFCY Location: 57897-58074 bp Feature: domain Description: YWFCY Location: 57897-58074 bp Feature: gene Location: 59348-59575 bp Feature: gene Location: 59581-61398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59848-60670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59848-60670 bp Feature: domain Description: Intron_maturas2 Location: 60814-61048 bp Feature: domain Description: Intron_maturas2 Location: 60814-61048 bp Feature: domain Description: HNHc Note: nucleases Location: 61219-61369 bp Feature: domain Description: HNHc Note: nucleases Location: 612 19-61369 bp Feature: gene Location: 61362-62390 bp Feature: domain Description: TraG-D_C Location: 61740-62073 bp Feature: domain Description: TraG-D_C Location: 61740-62 073 bp Feature: gene Location: 62476-63039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YWFCY (pfam14293), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696)

Seq: QRLA01000007.1 Bacteroides eggerthii strain AM14-12 AM14-12.Scaf7, whole genome shotgun sequence (226343 bp)
Overview 1 RT 1: 128603-138056 bp Neighborhood of RT #1 [128603, 138097] DUF1016_N YhcG_C N6_Mtase COG4646 RVT_N RVT-GII GIIM sigma70-ECF Feature: gene Location: 128603-129244 bp Feature: domain Description: DUF1016_N Location: 128660-129065 bp Feature: domain Description: DUF1016_N Location: 128660-129065 bp Feature: domain Description: YhcG_C Location: 129137-129242 bp Feature: domain Description: YhcG_C Location: 12913 7-129242 bp Feature: gene Location: 129681-133709 bp Feature: domain Description: N6_Mtase Location: 130209-130584 bp Feature: domain Description: N6_Mtase Location: 13 0209-13 0584 bp Feature: domain Description: COG4646 Location: 131349-133092 bp Feature: domain Description: COG4646 Location: 13 13 49-13 3 092 bp Feature: gene Location: 134366-136033 bp Feature: RT Description: RVT_N Location: 134420-134663 bp Feature: RT Description: RVT_N Location: 13 4420-13 4663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134708-135356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 4708-13 53 56 bp Feature: domain Description: GIIM Note: maturase Location: 135410-135641 bp Feature: domain Description: GIIM Note: maturase Location: 13 5410-13 5641 bp Feature: gene Location: 135987-137120 bp Feature: gene Location: 137573-138097 bp Feature: domain Description: sigma70-ECF Location: 137609-138056 bp Feature: domain Description: sigma70-ECF Location: 13 7609-13 8056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1016_N (pfam17761), YhcG_C, N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), sigma70-ECF (TIGR02937)