myRT

myRT report for GCA_003473415.1_ASM347341v1

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Seq: QRNO01000001.1 Prevotella stercorea strain AF42-9 AF42-9.Scaf1, whole genome shotgun sequence (134247 bp)
Overview 1 RT 1: 95069-102742 bp Neighborhood of RT #1 [95069, 104652] RVT-DGRs LamGL LamGL pfam08757 LRR_AMN1 Feature: gene Location: 95069-95326 bp Feature: gene Location: 95505-95960 bp Feature: gene Location: 95987-97288 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 96200-96794 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 96200-96794 bp Feature: gene Location: 97414-97614 bp Feature: gene Location: 97822-104652 bp Feature: domain Description: LamGL Location: 100405-100567 bp Feature: domain Description: LamGL Location: 1 00405-1 00567 bp Feature: domain Description: LamGL Location: 100918-101071 bp Feature: domain Description: LamGL Location: 1 0091 8-1 01 071 bp Feature: domain Description: pfam08757 Location: 101404-101704 bp Feature: domain Description: pfam08757 Location: 1 01 404-1 01 704 bp Feature: domain Description: LRR_AMN1 Location: 102328-102742 bp Feature: domain Description: LRR_AMN1 Location: 1 02328-1 02742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, LamGL (smart00560), pfam08757 (CotH;CotH kinase protein), LRR_AMN1 (sd00034)

Seq: QRNO01000002.1 Prevotella stercorea strain AF42-9 AF42-9.Scaf2, whole genome shotgun sequence (106335 bp)
Overview 1 RT 1: 98468-102701 bp Neighborhood of RT #1 [98468, 102701] RVT-DGRs Feature: gene Location: 98468-99829 bp Feature: gene Location: 99919-100068 bp Feature: gene Location: 100177-101487 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 100477-101101 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 100477-101101 bp Feature: gene Location: 101719-102099 bp Feature: gene Location: 102096-102701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: QRNO01000030.1 Prevotella stercorea strain AF42-9 AF42-9.Scaf30, whole genome shotgun sequence (36854 bp)
Overview 1 RT 1: 3946-12294 bp Neighborhood of RT #1 [3946, 12294] RVT_N RVT-GII GIIM N6_Mtase COG4646 Feature: gene Location: 3946-4350 bp Feature: gene Location: 4592-5671 bp Feature: gene Location: 5673-7340 bp Feature: RT Description: RVT_N Location: 5727-5970 bp Feature: RT Description: RVT_N Location: 5727-5970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6015-6663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6015-6663 bp Feature: domain Description: GIIM Note: maturase Location: 6717-6948 bp Feature: domain Description: GIIM Note: maturase Location: 6717-6948 bp Feature: gene Location: 7999-12036 bp Feature: domain Description: N6_Mtase Location: 8491-8905 bp Feature: domain Description: N6_Mtase Location: 8491-8905 bp Feature: domain Description: COG4646 Location: 9691-11419 bp Feature: domain Description: COG4646 Location: 9691-11419 bp Feature: gene Location: 12040-12294 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )