myRT

myRT report for GCA_003473525.1_ASM347352v1

Download annotations/find similar RTs

Seq: QUCL01000012.1 Clostridium sp. AM22-16AC AM22-16AC.Scaf12, whole genome shotgun sequence (93494 bp)
Overview 1 RT 1: 51011-56851 bp Neighborhood of RT #1 [51011, 57021] VirD4 RVT-GII Intron_maturas2 PrgI Feature: gene Location: 51011-52801 bp Feature: domain Description: VirD4 Location: 51170-52631 bp Feature: domain Description: VirD4 Location: 51 1 70-52631 bp Feature: gene Location: 52816-53142 bp Feature: gene Location: 53672-55450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53939-54749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53939-54749 bp Feature: domain Description: Intron_maturas2 Location: 54818-55106 bp Feature: domain Description: Intron_maturas2 Location: 5481 8-551 06 bp Feature: gene Location: 55718-56554 bp Feature: gene Location: 56569-57021 bp Feature: domain Description: PrgI Location: 56581-56851 bp Feature: domain Description: PrgI Location: 56581 -56851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), RVT-GII, Intron_maturas2 (pfam01348), PrgI (pfam12666)

Seq: QUCL01000033.1 Clostridium sp. AM22-16AC AM22-16AC.Scaf33, whole genome shotgun sequence (6019 bp)
Overview 1 RT 1: 2615-5779 bp Neighborhood of RT #1 [2615, 5779] FMN_red AcrR RVT-GII Feature: gene Location: 2615-3316 bp Feature: domain Description: FMN_red Location: 2618-3044 bp Feature: domain Description: FMN_red Location: 2 618-3044 bp Feature: gene Location: 3313-3942 bp Feature: domain Description: AcrR Location: 3322-3898 bp Feature: domain Description: AcrR Location: 332 2 -3898 bp Feature: gene Location: 4149-5444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4404-5094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4404-5094 bp Feature: gene Location: 5558-5779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FMN_red (pfam03358), AcrR (COG1309), RVT-GII