myRT

myRT report for GCA_003473545.1_ASM347354v1

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Seq: QUCM01000038.1 Clostridium sp. AM22-11AC AM22-11AC.Scaf38, whole genome shotgun sequence (10859 bp)
Overview 1 RT 1: 2-1071 bp Neighborhood of RT #1 [2, 1071] RVT-GII Feature: gene Location: 2-556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 257-509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 257-509 bp Feature: gene Location: 607-780 bp Feature: gene Location: 784-1071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QUCM01000004.1 Clostridium sp. AM22-11AC AM22-11AC.Scaf4, whole genome shotgun sequence (269949 bp)
Overview 1 RT 1: 249716-256424 bp Neighborhood of RT #1 [249716, 256699] TraX RVT-GII GIIM TnpV T4SS-DNA_transf T4SS-DNA_transf SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 Feature: gene Location: 249716-250240 bp Feature: gene Location: 250541-251371 bp Feature: domain Description: TraX Location: 250583-251342 bp Feature: domain Description: TraX Location: 2 50583-2 51342 bp Feature: gene Location: 251552-252835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251762-252377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 51762 -2 52 377 bp Feature: domain Description: GIIM Note: maturase Location: 252437-252653 bp Feature: domain Description: GIIM Note: maturase Location: 2 52 437-2 52 653 bp Feature: gene Location: 253365-253709 bp Feature: domain Description: TnpV Location: 253377-253701 bp Feature: domain Description: TnpV Location: 2 53377-2 53701 bp Feature: gene Location: 253706-256699 bp Feature: domain Description: T4SS-DNA_transf Location: 254129-254261 bp Feature: domain Description: T4SS-DNA_transf Location: 2 5412 9-2 542 61 bp Feature: domain Description: T4SS-DNA_transf Location: 254348-254651 bp Feature: domain Description: T4SS-DNA_transf Location: 2 54348-2 54651 bp Feature: domain Description: SR_TndX_transposase Location: 254837-255266 bp Feature: domain Description: SR_TndX_transposase Location: 2 54837-2 552 66 bp Feature: domain Description: Recombinase Location: 255362-255722 bp Feature: domain Description: Recombinase Location: 2 55362 -2 5572 2 bp Feature: domain Description: Zn_ribbon_recom Location: 255767-255953 bp Feature: domain Description: Zn_ribbon_recom Location: 2 55767-2 55953 bp Feature: domain Description: DUF4368 Location: 256229-256424 bp Feature: domain Description: DUF4368 Location: 2 562 2 9-2 5642 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraX (pfam05857), RVT-GII, GIIM (pfam08388), TnpV (pfam14198), T4SS-DNA_transf (pfam02534), SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287)