myRT

myRT report for GCA_003473745.1_ASM347374v1

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Seq: QUCP01000001.1 Ruminococcus sp. AM18-44 AM18-44.Scaf1, whole genome shotgun sequence (332657 bp)
Overview 1 RT 1: 303022-305312 bp Neighborhood of RT #1 [303022, 305312] RVT-DGRs Feature: gene Location: 303022-303168 bp Feature: gene Location: 303182-303454 bp Feature: gene Location: 303507-304709 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 303741-304329 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 303741 -304329 bp Feature: gene Location: 304609-304995 bp Feature: gene Location: 305130-305312 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: QUCP01000016.1 Ruminococcus sp. AM18-44 AM18-44.Scaf16, whole genome shotgun sequence (80850 bp)
Overview 1 RT 1: 77941-80638 bp Neighborhood of RT #1 [77941, 80706] BaeS RVT-GII GIIM Feature: gene Location: 77941-78858 bp Feature: domain Description: BaeS Location: 77956-78853 bp Feature: domain Description: BaeS Location: 77956-78853 bp Feature: gene Location: 79116-79325 bp Feature: gene Location: 79417-80706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79708-80341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79708-80341 bp Feature: domain Description: GIIM Note: maturase Location: 80422-80638 bp Feature: domain Description: GIIM Note: maturase Location: 8042 2 -80638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), RVT-GII, GIIM (pfam08388)

Seq: QUCP01000031.1 Ruminococcus sp. AM18-44 AM18-44.Scaf31, whole genome shotgun sequence (36917 bp)
Overview 1 RT 1: 285-2677 bp Neighborhood of RT #1 [285, 2679] RVT-GII M20_PepV YdhF Feature: gene Location: 285-503 bp Feature: gene Location: 560-757 bp Feature: gene Location: 760-1353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1075-1279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1075-1279 bp Feature: gene Location: 1337-1714 bp Feature: domain Description: M20_PepV Location: 1484-1688 bp Feature: domain Description: M20_PepV Location: 1484-1688 bp Feature: gene Location: 1762-2679 bp Feature: domain Description: YdhF Location: 1765-2677 bp Feature: domain Description: YdhF Location: 1765-2677 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, M20_PepV (cd03888), YdhF (COG4989)

Seq: QUCP01000004.1 Ruminococcus sp. AM18-44 AM18-44.Scaf4, whole genome shotgun sequence (201157 bp)
Overview 1 RT 1: 153151-156031 bp Neighborhood of RT #1 [153151, 156031] LbH_XAT RVT-GII Feature: gene Location: 153151-153564 bp Feature: domain Description: LbH_XAT Location: 153154-153475 bp Feature: domain Description: LbH_XAT Location: 153154 -1534 75 bp Feature: gene Location: 153789-153968 bp Feature: gene Location: 154058-155353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154313-155003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154 313-155003 bp Feature: gene Location: 155581-155889 bp Feature: gene Location: 155891-156031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LbH_XAT (cd03349), RVT-GII