myRT

myRT report for GCA_003473785.1_ASM347378v1

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Seq: QUCS01000018.1 Ruminococcus sp. AM18-15 AM18-15.Scaf18, whole genome shotgun sequence (80388 bp)
Overview 1 RT 1: 77412-80109 bp Neighborhood of RT #1 [77412, 80177] BaeS RVT-GII GIIM Feature: gene Location: 77412-78329 bp Feature: domain Description: BaeS Location: 77427-78324 bp Feature: domain Description: BaeS Location: 77427-78324 bp Feature: gene Location: 78587-78796 bp Feature: gene Location: 78888-80177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79179-79812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 791 79-7981 2 bp Feature: domain Description: GIIM Note: maturase Location: 79893-80109 bp Feature: domain Description: GIIM Note: maturase Location: 79893-801 09 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), RVT-GII, GIIM (pfam08388)

Seq: QUCS01000003.1 Ruminococcus sp. AM18-15 AM18-15.Scaf3, whole genome shotgun sequence (200593 bp)
Overview 1 RT 1: 45145-47936 bp Neighborhood of RT #1 [45145, 48025] RVT-GII LbH_XAT Feature: gene Location: 45145-45285 bp Feature: gene Location: 45287-45613 bp Feature: gene Location: 45823-47118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46078-46768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46078-46768 bp Feature: gene Location: 47171-47416 bp Feature: gene Location: 47612-48025 bp Feature: domain Description: LbH_XAT Location: 47615-47936 bp Feature: domain Description: LbH_XAT Location: 47615-47936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LbH_XAT (cd03349)

Seq: QUCS01000033.1 Ruminococcus sp. AM18-15 AM18-15.Scaf33, whole genome shotgun sequence (36995 bp)
Overview 1 RT 1: 34299-36693 bp Neighborhood of RT #1 [34299, 36693] YdhF M20_PepV RVT-GII Feature: gene Location: 34299-35216 bp Feature: domain Description: YdhF Location: 34302-35214 bp Feature: domain Description: YdhF Location: 3 43 02-3 5214 bp Feature: gene Location: 35264-35641 bp Feature: domain Description: M20_PepV Location: 35411-35615 bp Feature: domain Description: M20_PepV Location: 3 5411-3 5615 bp Feature: gene Location: 35625-36218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35940-36144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 5940-3 6144 bp Feature: gene Location: 36475-36693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdhF (COG4989), M20_PepV (cd03888), RVT-GII