myRT

myRT report for GCA_003473805.1_ASM347380v1

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Seq: QUCT01000012.1 Eubacterium sp. AM18-10LB-B AM18-10LB-B.Scaf12, whole genome shotgun sequence (52675 bp)
Overview 1 RT 1: 30-4865 bp Neighborhood of RT #1 [30, 4990] RVT-GII RVT-GII GIIM Smf PRK05582 PRK05582 Feature: gene Location: 30-347 bp Feature: gene Location: 526-1839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 808-1390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 808-1 390 bp Feature: domain Description: GIIM Note: maturase Location: 1450-1681 bp Feature: domain Description: GIIM Note: maturase Location: 1 450-1 681 bp Feature: gene Location: 1968-2696 bp Feature: domain Description: Smf Location: 2040-2685 bp Feature: domain Description: Smf Location: 2040-2685 bp Feature: gene Location: 2768-4990 bp Feature: domain Description: PRK05582 Location: 2771-4607 bp Feature: domain Description: PRK05582 Location: 2771 -4607 bp Feature: domain Description: PRK05582 Location: 4619-4865 bp Feature: domain Description: PRK05582 Location: 461 9-4865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Smf (COG0758), PRK05582 (type I DNA topoisomerase), RVT-GII, GIIM (pfam08388)

Seq: QUCT01000002.1 Eubacterium sp. AM18-10LB-B AM18-10LB-B.Scaf2, whole genome shotgun sequence (110386 bp)
Overview 1 RT 1: 101690-106755 bp Neighborhood of RT #1 [101690, 106755] TrbC VirD4 RVT-GII KOG4768 T4SS-DNA_transf Feature: gene Location: 101690-102025 bp Feature: domain Description: TrbC Location: 101726-102011 bp Feature: domain Description: TrbC Location: 10172 6-102 011 bp Feature: gene Location: 102132-103391 bp Feature: domain Description: VirD4 Location: 102141-103230 bp Feature: domain Description: VirD4 Location: 102 141-1032 30 bp Feature: gene Location: 103521-105299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103779-104481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103779-104481 bp Feature: domain Description: KOG4768 Location: 104571-104727 bp Feature: domain Description: KOG4768 Location: 104571-10472 7 bp Feature: gene Location: 106032-106580 bp Feature: domain Description: T4SS-DNA_transf Location: 106353-106533 bp Feature: domain Description: T4SS-DNA_transf Location: 106353-106533 bp Feature: gene Location: 106567-106755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrbC (pfam04956), VirD4 (COG3505), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), T4SS-DNA_transf (pfam02534)