myRT

myRT report for GCA_003473935.1_ASM347393v1

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Seq: QRNB01000001.1 Prevotella copri strain AF46-2NS AF46-2NS.Scaf1, whole genome shotgun sequence (106516 bp)
Overview 1 RT 1: 91800-94912 bp Neighborhood of RT #1 [91800, 94912] RVT-DGRs Feature: gene Location: 91800-92348 bp Feature: gene Location: 92620-92922 bp Feature: gene Location: 92949-94520 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 93159-93900 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 931 59-93900 bp Feature: gene Location: 94523-94693 bp Feature: gene Location: 94757-94912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: QRNB01000202.1 Prevotella copri strain AF46-2NS AF46-2NS.Scaf202, whole genome shotgun sequence (589 bp)
Overview 1 RT 1: 2-443 bp Neighborhood of RT #1 [2, 586] RVT-GII GIIM Feature: gene Location: 2-586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-182 bp Feature: domain Description: GIIM Note: maturase Location: 239-443 bp Feature: domain Description: GIIM Note: maturase Location: 2 39-443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QRNB01000027.1 Prevotella copri strain AF46-2NS AF46-2NS.Scaf27, whole genome shotgun sequence (40934 bp)
Overview 1 RT 1: 36794-40933 bp Neighborhood of RT #1 [36794, 40933] HrpA DEAH_box_HrpB RVT-GII GIIM Feature: gene Location: 36794-37708 bp Feature: domain Description: HrpA Location: 36806-37685 bp Feature: domain Description: HrpA Location: 3 6806-3 7685 bp Feature: gene Location: 37717-39369 bp Feature: domain Description: DEAH_box_HrpB Location: 37720-39364 bp Feature: domain Description: DEAH_box_HrpB Location: 3 7720-3 93 64 bp Feature: gene Location: 39506-40789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39728-40346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 9728-403 46 bp Feature: domain Description: GIIM Note: maturase Location: 40403-40601 bp Feature: domain Description: GIIM Note: maturase Location: 40403 -40601 bp Feature: gene Location: 40808-40933 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HrpA (COG1643), DEAH_box_HrpB (TIGR01970), RVT-GII, GIIM (pfam08388)

Seq: QRNB01000071.1 Prevotella copri strain AF46-2NS AF46-2NS.Scaf71, whole genome shotgun sequence (17648 bp)
Overview 1 RT 1: 16076-17645 bp Neighborhood of RT #1 [16076, 17647] RVT-GII Feature: gene Location: 16076-16348 bp Feature: gene Location: 16550-16720 bp Feature: gene Location: 16766-17647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17108-17645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17108-1764 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII