myRT

myRT report for GCA_003474005.1_ASM347400v1

Download annotations/find similar RTs

Seq: QRNI01000048.1 Bacteroides thetaiotaomicron strain AF45-16BH AF45-16BH.Scaf48, whole genome shotgun sequence (47659 bp)
Overview 1 RT 1: 6924-10084 bp Neighborhood of RT #1 [6924, 10110] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 6924-7070 bp Feature: gene Location: 7095-7370 bp Feature: gene Location: 7336-8757 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7708-8413 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7708-841 3 bp Feature: gene Location: 8772-9152 bp Feature: domain Description: Avd_like Location: 8799-9105 bp Feature: domain Description: Avd_like Location: 8799-91 05 bp Feature: gene Location: 9298-10110 bp Feature: domain Description: DUF1566 Location: 9829-10084 bp Feature: domain Description: DUF1 566 Location: 9829-1 0084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: QRNI01000052.1 Bacteroides thetaiotaomicron strain AF45-16BH AF45-16BH.Scaf52, whole genome shotgun sequence (46465 bp)
Overview 1 RT 1: 23387-26877 bp Neighborhood of RT #1 [23387, 26877] DUF1738 RVT-GII Intron_maturas2 MPTase-PolyVal Feature: gene Location: 23387-23710 bp Feature: domain Description: DUF1738 Location: 23390-23678 bp Feature: domain Description: DUF1738 Location: 2 3390-2 3678 bp Feature: gene Location: 23886-24143 bp Feature: gene Location: 24274-26085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24538-25360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4538-2 5360 bp Feature: domain Description: Intron_maturas2 Location: 25501-25741 bp Feature: domain Description: Intron_maturas2 Location: 2 5501-2 5741 bp Feature: gene Location: 26087-26545 bp Feature: domain Description: MPTase-PolyVal Location: 26354-26540 bp Feature: domain Description: MPTase-PolyVal Location: 2 6354-2 6540 bp Feature: gene Location: 26563-26877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1738 (pfam08401), RVT-GII, Intron_maturas2 (pfam01348), MPTase-PolyVal (pfam18818)

Seq: QRNI01000007.1 Bacteroides thetaiotaomicron strain AF45-16BH AF45-16BH.Scaf7, whole genome shotgun sequence (130903 bp)
Overview 1 RT 1: 68850-80481 bp Neighborhood of RT #1 [68850, 80481] rpsA DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 RVT-Retrons Feature: gene Location: 68850-70649 bp Feature: domain Description: rpsA Location: 68919-70533 bp Feature: domain Description: rpsA Location: 68919-7053 3 bp Feature: gene Location: 70818-76640 bp Feature: domain Description: DUF4011 Location: 71973-72486 bp Feature: domain Description: DUF4011 Location: 71973 -72486 bp Feature: domain Description: DEXXQc_SF1 Location: 72825-73368 bp Feature: domain Description: DEXXQc_SF1 Location: 72825-73 3 68 bp Feature: domain Description: DEXXQc_SF1 Location: 74259-75012 bp Feature: domain Description: DEXXQc_SF1 Location: 74259-75012 bp Feature: domain Description: TIGR00376 Location: 75141-75534 bp Feature: domain Description: TIGR003 76 Location: 75141-7553 4 bp Feature: domain Description: MTES_1575 Location: 75684-75972 bp Feature: domain Description: MTES_1575 Location: 75684-75972 bp Feature: domain Description: DUF3320 Location: 76146-76290 bp Feature: domain Description: DUF3 3 20 Location: 76146-76290 bp Feature: gene Location: 76677-77810 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 77001-77547 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 77001-77547 bp Feature: gene Location: 78016-80202 bp Feature: gene Location: 80347-80481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), RVT-Retrons