myRT

myRT report for GCA_003474175.1_ASM347417v1

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Seq: QRNY01000159.1 Bacteroides stercoris strain AF41-6 AF41-6.Scaf159, whole genome shotgun sequence (1148 bp)
Overview 1 RT 1: 18-651 bp Neighborhood of RT #1 [18, 1145] RVT-DGRs Feature: gene Location: 18-1145 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57-651 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57-651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: QRNY01000054.1 Bacteroides stercoris strain AF41-6 AF41-6.Scaf54, whole genome shotgun sequence (24632 bp)
Overview 1 RT 1: 3051-10652 bp Neighborhood of RT #1 [3051, 10669] SMC_prok_B Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Feature: gene Location: 3051-5612 bp Feature: domain Description: SMC_prok_B Location: 4608-5001 bp Feature: domain Description: SMC_prok_B Location: 4608-5001 bp Feature: gene Location: 5619-6332 bp Feature: domain Description: Bac_Flav_CT_G Location: 5676-6222 bp Feature: domain Description: Bac_Flav_CT_G Location: 5676-62 2 2 bp Feature: gene Location: 6392-8203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6656-7478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6656-7478 bp Feature: domain Description: Intron_maturas2 Location: 7547-7904 bp Feature: domain Description: Intron_maturas2 Location: 7547-7904 bp Feature: domain Description: HNHc Note: nucleases Location: 8027-8174 bp Feature: domain Description: HNHc Note: nucleases Location: 802 7-8174 bp Feature: gene Location: 8416-8625 bp Feature: gene Location: 8753-10669 bp Feature: domain Description: Bac_Flav_CT_G Location: 8900-10652 bp Feature: domain Description: Bac_Flav_CT_G Location: 8900-10652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SMC_prok_B (TIGR02168), Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: QRNY01000063.1 Bacteroides stercoris strain AF41-6 AF41-6.Scaf63, whole genome shotgun sequence (18415 bp)
Overview 1 RT 1: 11415-18315 bp Neighborhood of RT #1 [11415, 18380] DUF1896 N6_Mtase COG4646 matK RVT-GII Intron_maturas2 COG4646 Feature: gene Location: 11415-11864 bp Feature: domain Description: DUF1896 Location: 11445-11853 bp Feature: domain Description: DUF1896 Location: 11445-11853 bp Feature: gene Location: 11851-15336 bp Feature: domain Description: N6_Mtase Location: 12142-12781 bp Feature: domain Description: N6_Mtase Location: 12142-12781 bp Feature: domain Description: COG4646 Location: 14389-15325 bp Feature: domain Description: COG4646 Location: 143 89-153 25 bp Feature: gene Location: 15888-18380 bp Feature: domain Description: matK Location: 15957-16044 bp Feature: domain Description: matK Location: 15957-16044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16152-16974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16152-16974 bp Feature: domain Description: Intron_maturas2 Location: 17124-17358 bp Feature: domain Description: Intron_maturas2 Location: 17124-173 58 bp Feature: domain Description: COG4646 Location: 17790-18315 bp Feature: domain Description: COG4646 Location: 17790-183 15 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1896 (pfam08989), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), matK (CHL00002), RVT-GII, Intron_maturas2 (pfam01348)