myRT

myRT report for GCA_003474285.1_ASM347428v1

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Seq: QROH01000002.1 Bacteroides sp. AF39-11AC AF39-11AC.Scaf2, whole genome shotgun sequence (788589 bp)
Overview 1 RT 1: 601948-606252 bp Neighborhood of RT #1 [601948, 606260] RVT-Retrons MFS_DtpA_like HptA Feature: gene Location: 601948-602217 bp Feature: gene Location: 602279-602497 bp Feature: gene Location: 602754-603875 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 603066-603618 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 603066-60361 8 bp Feature: gene Location: 604146-605684 bp Feature: domain Description: MFS_DtpA_like Location: 604167-605655 bp Feature: domain Description: MFS_DtpA_like Location: 6041 67-605655 bp Feature: gene Location: 605724-606260 bp Feature: domain Description: HptA Location: 605742-606252 bp Feature: domain Description: HptA Location: 605742-606252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, MFS_DtpA_like (cd17346), HptA (COG0634)

Seq: QROH01000009.1 Bacteroides sp. AF39-11AC AF39-11AC.Scaf9, whole genome shotgun sequence (327318 bp)
Overview 1 RT 1: 310246-318872 bp Neighborhood of RT #1 [310246, 320077] PRK06917 N6_Mtase COG4646 RVT_N RVT-GII GIIM KAP_NTPase Feature: gene Location: 310246-310500 bp Feature: gene Location: 310504-314541 bp Feature: domain Description: PRK06917 Location: 310543-310762 bp Feature: domain Description: PRK06917 Location: 310543-310762 bp Feature: domain Description: N6_Mtase Location: 310996-311410 bp Feature: domain Description: N6_Mtase Location: 310996-311410 bp Feature: domain Description: COG4646 Location: 312193-313924 bp Feature: domain Description: COG4646 Location: 312 193-31392 4 bp Feature: gene Location: 315198-316865 bp Feature: RT Description: RVT_N Location: 315252-315495 bp Feature: RT Description: RVT_N Location: 3152 52 -315495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 315540-316188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 315540-316188 bp Feature: domain Description: GIIM Note: maturase Location: 316242-316473 bp Feature: domain Description: GIIM Note: maturase Location: 3162 42 -316473 bp Feature: gene Location: 316819-317946 bp Feature: gene Location: 318188-320077 bp Feature: domain Description: KAP_NTPase Location: 318236-318872 bp Feature: domain Description: KAP_NTPase Location: 3182 36-318872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06917 (aspartate aminotransferase family protein), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), KAP_NTPase (pfam07693)