myRT

myRT report for GCA_003474465.1_ASM347446v1

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Seq: QRNH01000102.1 Bacteroides ovatus strain AF45-17BH AF45-17BH.Scaf102, whole genome shotgun sequence (18883 bp)
Overview 1 RT 1: 944-5632 bp Neighborhood of RT #1 [944, 5632] RVT-UG27 Feature: gene Location: 944-1546 bp Feature: gene Location: 1629-1859 bp Feature: gene Location: 1856-3124 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 2045-2681 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 2045-2681 bp Feature: gene Location: 4150-4608 bp Feature: gene Location: 4643-5632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: QRNH01000114.1 Bacteroides ovatus strain AF45-17BH AF45-17BH.Scaf114, whole genome shotgun sequence (13809 bp)
Overview 1 RT 1: 4632-10616 bp Neighborhood of RT #1 [4632, 11464] RVT-DGRs CotH Feature: gene Location: 4632-4874 bp Feature: gene Location: 5054-5539 bp Feature: gene Location: 5536-6858 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5767-6361 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5767-6361 bp Feature: gene Location: 7356-9305 bp Feature: gene Location: 9317-11464 bp Feature: domain Description: CotH Location: 10262-10616 bp Feature: domain Description: CotH Location: 102 62 -10616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, CotH (pfam08757)

Seq: QRNH01000017.1 Bacteroides ovatus strain AF45-17BH AF45-17BH.Scaf17, whole genome shotgun sequence (92140 bp)
Overview 1 RT 1: 585-10067 bp Neighborhood of RT #1 [585, 10084] RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 Feature: gene Location: 585-941 bp Feature: gene Location: 986-2791 bp Feature: gene Location: 2996-4126 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3317-3860 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 3 17-3 860 bp Feature: gene Location: 4128-4496 bp Feature: gene Location: 4481-10084 bp Feature: domain Description: DUF4011 Location: 5711-6224 bp Feature: domain Description: DUF4011 Location: 5711-6224 bp Feature: domain Description: DEXXQc_SF1 Location: 6563-7397 bp Feature: domain Description: DEXXQc_SF1 Location: 6563 -73 97 bp Feature: domain Description: DEXXQc_SF1 Location: 7991-8750 bp Feature: domain Description: DEXXQc_SF1 Location: 7991-8750 bp Feature: domain Description: TIGR00376 Location: 8879-9269 bp Feature: domain Description: TIGR003 76 Location: 8879-9269 bp Feature: domain Description: MTES_1575 Location: 9422-9707 bp Feature: domain Description: MTES_1575 Location: 9422-9707 bp Feature: domain Description: DUF3320 Location: 9947-10067 bp Feature: domain Description: DUF3 3 20 Location: 9947-10067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784)

Seq: QRNH01000002.1 Bacteroides ovatus strain AF45-17BH AF45-17BH.Scaf2, whole genome shotgun sequence (193844 bp)
Overview 1 RT 1: 62436-66526 bp Neighborhood of RT #1 [62436, 66555] DUF4141 RVT-GII RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_J Feature: gene Location: 62436-62663 bp Feature: domain Description: DUF4141 Location: 62448-62604 bp Feature: domain Description: DUF4 14 1 Location: 624 4 8-62604 bp Feature: gene Location: 62703-62864 bp Feature: gene Location: 63184-63615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63478-63607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 634 78-63607 bp Feature: gene Location: 63633-65018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63642-64299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6364 2-64 299 bp Feature: domain Description: Intron_maturas2 Location: 64458-64827 bp Feature: domain Description: Intron_maturas2 Location: 64 4 58-64 827 bp Feature: domain Description: HNHc Note: nucleases Location: 64851-64992 bp Feature: domain Description: HNHc Note: nucleases Location: 64 851-64 992 bp Feature: gene Location: 65011-65547 bp Feature: gene Location: 65551-66555 bp Feature: domain Description: Bac_Flav_CT_J Location: 65560-66526 bp Feature: domain Description: Bac_Flav_CT_J Location: 65560-66526 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4141 (pfam13605), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_J (TIGR03782)

Seq: QRNH01000068.1 Bacteroides ovatus strain AF45-17BH AF45-17BH.Scaf68, whole genome shotgun sequence (36177 bp)
Overview 1 RT 1: 27766-34201 bp Neighborhood of RT #1 [27766, 34201] RVT-DGRs Feature: gene Location: 27766-31479 bp Feature: gene Location: 31653-31892 bp Feature: gene Location: 31994-33391 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 32207-32801 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 32207-32801 bp Feature: gene Location: 33294-33779 bp Feature: gene Location: 33959-34201 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: QRNH01000076.1 Bacteroides ovatus strain AF45-17BH AF45-17BH.Scaf76, whole genome shotgun sequence (31105 bp)
Overview 1 RT 1: 3-6094 bp Neighborhood of RT #1 [3, 6105] DUF1566 RVT-DGRs Avd_like DUF1566 Feature: gene Location: 3-1415 bp Feature: gene Location: 1478-1831 bp Feature: gene Location: 1822-3243 bp Feature: domain Description: DUF1566 Location: 1894-2038 bp Feature: domain Description: DUF156 6 Location: 1894-2038 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2227-2968 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2227-296 8 bp Feature: gene Location: 3256-3657 bp Feature: domain Description: Avd_like Location: 3295-3634 bp Feature: domain Description: Avd_like Location: 3295-36 34 bp Feature: gene Location: 3787-6105 bp Feature: domain Description: DUF1566 Location: 5791-6094 bp Feature: domain Description: DUF156 6 Location: 5791-6 094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376)