myRT

myRT report for GCA_003474595.1_ASM347459v1

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Seq: QROK01000017.1 Bacteroides vulgatus strain AF39-1 AF39-1.Scaf17, whole genome shotgun sequence (110800 bp)
Overview 1 RT 1: 95255-103881 bp Neighborhood of RT #1 [95255, 105086] PRK06917 N6_Mtase COG4646 RVT_N RVT-GII GIIM KAP_NTPase Feature: gene Location: 95255-95509 bp Feature: gene Location: 95513-99550 bp Feature: domain Description: PRK06917 Location: 95552-95771 bp Feature: domain Description: PRK0691 7 Location: 95552-95771 bp Feature: domain Description: N6_Mtase Location: 96005-96419 bp Feature: domain Description: N6_Mtase Location: 96005-9641 9 bp Feature: domain Description: COG4646 Location: 97202-98933 bp Feature: domain Description: COG4646 Location: 97202-98933 bp Feature: gene Location: 100207-101874 bp Feature: RT Description: RVT_N Location: 100261-100504 bp Feature: RT Description: RVT_N Location: 1 00261 -1 00504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100549-101197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 00549-1 01 1 97 bp Feature: domain Description: GIIM Note: maturase Location: 101251-101482 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 251 -1 01 482 bp Feature: gene Location: 101828-102955 bp Feature: gene Location: 103197-105086 bp Feature: domain Description: KAP_NTPase Location: 103245-103881 bp Feature: domain Description: KAP_NTPase Location: 1 03245-1 03881 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), KAP_NTPase (pfam07693), PRK06917 (aspartate aminotransferase family protein), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: QROK01000020.1 Bacteroides vulgatus strain AF39-1 AF39-1.Scaf20, whole genome shotgun sequence (84297 bp)
Overview 1 RT 1: 47396-50775 bp Neighborhood of RT #1 [47396, 50775] RVT-DGRs Feature: gene Location: 47396-48715 bp Feature: gene Location: 48745-48948 bp Feature: gene Location: 49232-50047 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 49565-49892 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 49565-49892 bp Feature: gene Location: 50013-50243 bp Feature: gene Location: 50191-50775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs