myRT

myRT report for GCA_003475215.1_ASM347521v1

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Seq: QRPD01000019.1 Dorea formicigenerans strain AF36-1BH AF36-1BH.Scaf19, whole genome shotgun sequence (75990 bp)
Overview 1 RT 1: 28237-33116 bp Neighborhood of RT #1 [28237, 33116] RVT-DGRs Feature: gene Location: 28237-30999 bp Feature: gene Location: 31063-31341 bp Feature: gene Location: 31432-32613 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31672-32335 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31 672-32335 bp Feature: gene Location: 32561-32917 bp Feature: gene Location: 32967-33116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: QRPD01000003.1 Dorea formicigenerans strain AF36-1BH AF36-1BH.Scaf3, whole genome shotgun sequence (271797 bp)
Overview 1 RT 1: 122379-127528 bp Neighborhood of RT #1 [122379, 127528] DUF4314 VirD4 RVT-GII T4SS-DNA_transf Feature: gene Location: 122379-122657 bp Feature: domain Description: DUF4314 Location: 122397-122589 bp Feature: domain Description: DUF4314 Location: 12 2 397-12 2 589 bp Feature: gene Location: 122690-123373 bp Feature: domain Description: VirD4 Location: 122912-123362 bp Feature: domain Description: VirD4 Location: 12 2 912 -12 3362 bp Feature: gene Location: 124051-125958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124381-125125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 4381-12 512 5 bp Feature: gene Location: 126060-127151 bp Feature: domain Description: T4SS-DNA_transf Location: 126099-126978 bp Feature: domain Description: T4SS-DNA_transf Location: 12 6099-12 6978 bp Feature: gene Location: 127160-127528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4314 (pfam14192), VirD4 (COG3505), RVT-GII, T4SS-DNA_transf (pfam02534)

Seq: QRPD01000004.1 Dorea formicigenerans strain AF36-1BH AF36-1BH.Scaf4, whole genome shotgun sequence (253416 bp)
Overview 1 RT 1: 58353-65113 bp Neighborhood of RT #1 [58353, 65113] Prophage_tail Peptidase_S74 Smc RVT-DGRs Feature: gene Location: 58353-60752 bp Feature: domain Description: Prophage_tail Location: 58392-59352 bp Feature: domain Description: Prophage_tail Location: 583 92-593 52 bp Feature: domain Description: Peptidase_S74 Location: 60447-60591 bp Feature: domain Description: Peptidase_S74 Location: 60447-60591 bp Feature: gene Location: 60999-63140 bp Feature: domain Description: Smc Location: 61089-61746 bp Feature: domain Description: Smc Location: 61089-61746 bp Feature: gene Location: 63544-64674 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 63748-64411 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 63 748-64411 bp Feature: gene Location: 64671-64934 bp Feature: gene Location: 64955-65113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prophage_tail (pfam06605), Peptidase_S74 (pfam13884), Smc (COG1196), RVT-DGRs

Seq: QRPD01000005.1 Dorea formicigenerans strain AF36-1BH AF36-1BH.Scaf5, whole genome shotgun sequence (202261 bp)
Overview 1 RT 1: 193521-198251 bp Neighborhood of RT #1 [193521, 198251] PHA00430 RVT-DGRs Feature: gene Location: 193521-195860 bp Feature: domain Description: PHA00430 Location: 193944-194487 bp Feature: domain Description: PHA004 30 Location: 19394 4 -194 4 87 bp Feature: gene Location: 196057-196206 bp Feature: gene Location: 196370-197641 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 196670-197330 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 196670-197330 bp Feature: gene Location: 197921-198067 bp Feature: gene Location: 198060-198251 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00430 (tail fiber protein), RVT-DGRs