myRT

myRT report for GCA_003475275.1_ASM347527v1

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Seq: QRPQ01000001.1 Blautia obeum strain AF35-14AC AF35-14AC.Scaf1, whole genome shotgun sequence (514356 bp)
Overview 1 RT 1: 304570-309289 bp Neighborhood of RT #1 [304570, 309289] DUF4268 RVT-Retrons PRTase_2 HTH_MARR Feature: gene Location: 304570-305490 bp Feature: domain Description: DUF4268 Location: 305086-305488 bp Feature: domain Description: DUF4268 Location: 305086-305488 bp Feature: gene Location: 305591-305770 bp Feature: gene Location: 305871-306980 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 306183-306741 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3061 83-306741 bp Feature: gene Location: 307132-308322 bp Feature: domain Description: PRTase_2 Location: 307510-307708 bp Feature: domain Description: PRTase_2 Location: 30751 0-307708 bp Feature: domain Description: HTH_MARR Location: 308044-308176 bp Feature: domain Description: HTH_MARR Location: 308044-3081 76 bp Feature: gene Location: 308417-309289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4268 (pfam14088), RVT-Retrons, PRTase_2 (pfam15609), HTH_MARR (smart00347)

Seq: QRPQ01000016.1 Blautia obeum strain AF35-14AC AF35-14AC.Scaf16, whole genome shotgun sequence (69895 bp)
Overview 1 RT 1: 44641-50780 bp Neighborhood of RT #1 [44641, 50881] VirD4 Maff2 RVT-GII HNHc PrgI Feature: gene Location: 44641-46464 bp Feature: domain Description: VirD4 Location: 44899-46330 bp Feature: domain Description: VirD4 Location: 44899-46330 bp Feature: gene Location: 46592-46723 bp Feature: domain Description: Maff2 Location: 46595-46721 bp Feature: domain Description: Maff2 Location: 46595-4672 1 bp Feature: gene Location: 47443-49329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47776-48514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47776-48514 bp Feature: domain Description: HNHc Note: nucleases Location: 49063-49213 bp Feature: domain Description: HNHc Note: nucleases Location: 49063-492 13 bp Feature: gene Location: 49597-50469 bp Feature: gene Location: 50492-50881 bp Feature: domain Description: PrgI Location: 50510-50780 bp Feature: domain Description: PrgI Location: 50510-50780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), Maff2 (pfam12750), RVT-GII, HNHc (smart00507), PrgI (pfam12666)

Seq: QRPQ01000002.1 Blautia obeum strain AF35-14AC AF35-14AC.Scaf2, whole genome shotgun sequence (506209 bp)
Overview 1 RT 1: 5586-9295 bp Neighborhood of RT #1 [5586, 9306] OmpR RVT-GII GIIM RVT-GII BID_2 Feature: gene Location: 5586-6284 bp Feature: domain Description: OmpR Location: 5598-6279 bp Feature: domain Description: OmpR Location: 5598-6279 bp Feature: gene Location: 6315-6518 bp Feature: gene Location: 6529-7512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6538-7129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 653 8-7129 bp Feature: domain Description: GIIM Note: maturase Location: 7201-7423 bp Feature: domain Description: GIIM Note: maturase Location: 7201-7423 bp Feature: gene Location: 8075-8800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8288-8669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8288-8669 bp Feature: gene Location: 8809-8955 bp Feature: gene Location: 8962-9306 bp Feature: domain Description: BID_2 Location: 9079-9295 bp Feature: domain Description: BID_2 Location: 9079-9295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OmpR (COG0745), RVT-GII, GIIM (pfam08388), BID_2 (smart00635)

Seq: QRPQ01000009.1 Blautia obeum strain AF35-14AC AF35-14AC.Scaf9, whole genome shotgun sequence (158288 bp)
Overview 1 RT 1: 132080-137005 bp Neighborhood of RT #1 [132080, 137067] pfam12571 RVT-DGRs ABC_trans_CmpB Feature: gene Location: 132080-132460 bp Feature: domain Description: pfam12571 Location: 132092-132416 bp Feature: domain Description: pfam12571 Location: 132092-1324 16 bp Feature: gene Location: 132529-134205 bp Feature: gene Location: 134608-135963 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 134917-135559 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 134 917-135559 bp Feature: gene Location: 135956-136645 bp Feature: gene Location: 136642-137067 bp Feature: domain Description: ABC_trans_CmpB Location: 136699-137005 bp Feature: domain Description: ABC_trans_CmpB Location: 136699-137005 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam12571 (DUF3751;Phage tail-collar fibre protein), RVT-DGRs, ABC_trans_CmpB (pfam06541)