myRT

myRT report for GCA_003475515.1_ASM347551v1

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Seq: QRQN01000001.1 Roseburia intestinalis strain AF31-21AC AF31-21AC.Scaf1, whole genome shotgun sequence (364594 bp)
Overview 1 RT 1: 339133-342578 bp Neighborhood of RT #1 [339133, 342578] Phage_XkdX RVT-DGRs Feature: gene Location: 339133-339345 bp Feature: domain Description: Phage_XkdX Location: 339220-339337 bp Feature: domain Description: Phage_XkdX Location: 339220-339337 bp Feature: gene Location: 339347-339520 bp Feature: gene Location: 339525-340679 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 339846-340455 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 339846-340455 bp Feature: gene Location: 340862-341278 bp Feature: gene Location: 341346-342578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs

Seq: QRQN01000027.1 Roseburia intestinalis strain AF31-21AC AF31-21AC.Scaf27, whole genome shotgun sequence (52594 bp)
Overview 1 RT 1: 26-2299 bp Neighborhood of RT #1 [26, 2355] RVT-GII GIIM FliS FlgN Feature: gene Location: 26-1345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 272-887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 72 -887 bp Feature: domain Description: GIIM Note: maturase Location: 947-1163 bp Feature: domain Description: GIIM Note: maturase Location: 947-1163 bp Feature: gene Location: 1482-1862 bp Feature: domain Description: FliS Location: 1503-1839 bp Feature: domain Description: FliS Location: 1503-1839 bp Feature: gene Location: 1876-2355 bp Feature: domain Description: FlgN Location: 1906-2299 bp Feature: domain Description: FlgN Location: 1906-2 2 99 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), FliS (pfam02561), FlgN (pfam05130)

Seq: QRQN01000007.1 Roseburia intestinalis strain AF31-21AC AF31-21AC.Scaf7, whole genome shotgun sequence (178521 bp)
Overview 1 RT 1: 3300-10269 bp Neighborhood of RT #1 [3300, 10319] TIGR02680 TIGR02679 RVT-GII Tar Feature: gene Location: 3300-7409 bp Feature: domain Description: TIGR02680 Location: 3312-7341 bp Feature: domain Description: TIGR02680 Location: 3 3 12-73 41 bp Feature: gene Location: 7387-8667 bp Feature: domain Description: TIGR02679 Location: 7504-8644 bp Feature: domain Description: TIGR02679 Location: 7504-8644 bp Feature: gene Location: 8699-8932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8762-8906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8762-8906 bp Feature: gene Location: 8919-9131 bp Feature: gene Location: 9234-10319 bp Feature: domain Description: Tar Location: 9378-10269 bp Feature: domain Description: Tar Location: 93 78-10269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02680 (TIGR02680 family protein), TIGR02679 (TIGR02679 family protein), RVT-GII, Tar (COG0840)

Seq: QRQN01000008.1 Roseburia intestinalis strain AF31-21AC AF31-21AC.Scaf8, whole genome shotgun sequence (172241 bp)
Overview 1 RT 1: 1-3659 bp Neighborhood of RT #1 [1, 4300] MobA_MobL RVT-GII GIIM Tropomyosin_1 Feature: gene Location: 1-1317 bp Feature: domain Description: MobA_MobL Location: 46-916 bp Feature: domain Description: MobA_MobL Location: 4 6-916 bp Feature: gene Location: 1490-1684 bp Feature: gene Location: 1776-3065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2067-2700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2067-2700 bp Feature: domain Description: GIIM Note: maturase Location: 2781-2994 bp Feature: domain Description: GIIM Note: maturase Location: 2781-2994 bp Feature: gene Location: 3140-3328 bp Feature: gene Location: 3347-4300 bp Feature: domain Description: Tropomyosin_1 Location: 3356-3659 bp Feature: domain Description: Tropomyosin_1 Location: 3356-3659 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MobA_MobL (pfam03389), RVT-GII, GIIM (pfam08388), Tropomyosin_1 (pfam12718)