myRT

myRT report for GCA_003475585.1_ASM347558v1

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Seq: QRQR01000041.1 Escherichia coli strain AF31-11BH AF31-11BH.Scaf41, whole genome shotgun sequence (36908 bp)
Overview 1 RT 1: 15270-19561 bp Neighborhood of RT #1 [15270, 19561] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 15270-16532 bp Feature: domain Description: YesM Location: 15783-16524 bp Feature: domain Description: YesM Location: 1 5783-1 6524 bp Feature: gene Location: 16562-16732 bp Feature: gene Location: 17082-17603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17088-17370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7088-1 7370 bp Feature: domain Description: GIIM Note: maturase Location: 17418-17598 bp Feature: domain Description: GIIM Note: maturase Location: 1 741 8-1 7598 bp Feature: gene Location: 17631-18170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17961-18039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7961 -1 8039 bp Feature: gene Location: 18201-18398 bp Feature: gene Location: 18656-19561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: QRQR01000068.1 Escherichia coli strain AF31-11BH AF31-11BH.Scaf68, whole genome shotgun sequence (8619 bp)
Overview 1 RT 1: 3477-5921 bp Neighborhood of RT #1 [3477, 5921] DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C Feature: gene Location: 3477-3752 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3528-3711 bp Feature: domain Description: DDE_Tnp_IS66 Location: 352 8-3711 bp Feature: gene Location: 3960-4121 bp Feature: gene Location: 4214-5446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4415-5069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4415-5069 bp Feature: domain Description: GIIM Note: maturase Location: 5147-5369 bp Feature: domain Description: GIIM Note: maturase Location: 5147-5369 bp Feature: gene Location: 5559-5708 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 5574-5685 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 5574-5685 bp Feature: gene Location: 5784-5921 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817)