myRT

myRT report for GCA_003475695.1_ASM347569v1

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Seq: QRPW01000002.1 Bacteroides vulgatus strain AF34-15 AF34-15.Scaf2, whole genome shotgun sequence (318735 bp)
Overview 1 RT 1: 4164-11049 bp Neighborhood of RT #1 [4164, 11049] AAA_25 RVT-GII Intron_maturas2 Toprim_2 Feature: gene Location: 4164-5711 bp Feature: domain Description: AAA_25 Location: 4779-5241 bp Feature: domain Description: AAA_25 Location: 4779-5241 bp Feature: gene Location: 5923-6105 bp Feature: gene Location: 6654-8462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6918-7740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 691 8-7740 bp Feature: domain Description: Intron_maturas2 Location: 7809-8118 bp Feature: domain Description: Intron_maturas2 Location: 7809-81 1 8 bp Feature: gene Location: 8434-9363 bp Feature: domain Description: Toprim_2 Location: 8986-9274 bp Feature: domain Description: Toprim_2 Location: 8986-9274 bp Feature: gene Location: 9646-11049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_25 (pfam13481), RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155)

Seq: QRPW01000031.1 Bacteroides vulgatus strain AF34-15 AF34-15.Scaf31, whole genome shotgun sequence (43306 bp)
Overview 1 RT 1: 15023-18840 bp Neighborhood of RT #1 [15023, 18905] dnaG RVT-GII Intron_maturas2 Toprim_2 DUF3872 Feature: gene Location: 15023-15214 bp Feature: domain Description: dnaG Location: 15101-15200 bp Feature: domain Description: dnaG Location: 15101-152 00 bp Feature: gene Location: 15456-15629 bp Feature: gene Location: 15759-17567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16023-16845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1602 3-16845 bp Feature: domain Description: Intron_maturas2 Location: 16941-17226 bp Feature: domain Description: Intron_maturas2 Location: 16941-172 2 6 bp Feature: gene Location: 17557-18405 bp Feature: domain Description: Toprim_2 Location: 18097-18352 bp Feature: domain Description: Toprim_2 Location: 18097-18352 bp Feature: gene Location: 18402-18905 bp Feature: domain Description: DUF3872 Location: 18453-18840 bp Feature: domain Description: DUF3872 Location: 18453-18840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaG (TIGR01391), RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155), DUF3872 (pfam12988)

Seq: QRPW01000052.1 Bacteroides vulgatus strain AF34-15 AF34-15.Scaf52, whole genome shotgun sequence (2419 bp)
Overview 1 RT 1: 122-2240 bp Neighborhood of RT #1 [122, 2240] RVT_N RVT-GII GIIM Feature: gene Location: 122-1774 bp Feature: RT Description: RVT_N Location: 176-419 bp Feature: RT Description: RVT_N Location: 176-419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1112 bp Feature: domain Description: GIIM Note: maturase Location: 1166-1397 bp Feature: domain Description: GIIM Note: maturase Location: 1166-13 97 bp Feature: gene Location: 2091-2240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: QRPW01000007.1 Bacteroides vulgatus strain AF34-15 AF34-15.Scaf7, whole genome shotgun sequence (216977 bp)
Overview 1 RT 1: 27359-32025 bp Neighborhood of RT #1 [27359, 32025] DUF4988 RVT-GII Feature: gene Location: 27359-30448 bp Feature: domain Description: DUF4988 Location: 27440-27905 bp Feature: domain Description: DUF4 988 Location: 274 4 0-27905 bp Feature: gene Location: 30901-31185 bp Feature: gene Location: 31198-31446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31288-31441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31288-314 4 1 bp Feature: gene Location: 31676-31822 bp Feature: gene Location: 31837-32025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4988 (pfam16378), RVT-GII