myRT

myRT report for GCA_003477605.1_ASM347760v1

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Seq: QUDR01000010.1 Clostridium sp. AF37-5 AF37-5.Scaf10, whole genome shotgun sequence (107101 bp)
Overview 1 RT 1: 39165-47484 bp Neighborhood of RT #1 [39165, 49181] CAP_bacterial RVT-GII GIIM SpaA SpaA SpaA SpaA SpaA SpaA SpaA LPXTG_anchor SIR2_2 Feature: gene Location: 39165-40007 bp Feature: domain Description: CAP_bacterial Location: 39537-39852 bp Feature: domain Description: CAP_bacterial Location: 39537-39852 bp Feature: gene Location: 40517-40681 bp Feature: gene Location: 40695-42113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41046-41667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 046-41 667 bp Feature: domain Description: GIIM Note: maturase Location: 41721-41946 bp Feature: domain Description: GIIM Note: maturase Location: 41 721 -41 946 bp Feature: gene Location: 42206-46534 bp Feature: domain Description: SpaA Location: 43676-43907 bp Feature: domain Description: SpaA Location: 43676-43907 bp Feature: domain Description: SpaA Location: 44036-44240 bp Feature: domain Description: SpaA Location: 44036-44240 bp Feature: domain Description: SpaA Location: 44339-44567 bp Feature: domain Description: SpaA Location: 44339-44567 bp Feature: domain Description: SpaA Location: 44735-45008 bp Feature: domain Description: SpaA Location: 44735-45008 bp Feature: domain Description: SpaA Location: 45158-45584 bp Feature: domain Description: SpaA Location: 451 58-45584 bp Feature: domain Description: SpaA Location: 45674-45920 bp Feature: domain Description: SpaA Location: 45674-45920 bp Feature: domain Description: SpaA Location: 46163-46352 bp Feature: domain Description: SpaA Location: 461 63-46352 bp Feature: domain Description: LPXTG_anchor Location: 46418-46505 bp Feature: domain Description: LPXTG_anchor Location: 4641 8-46505 bp Feature: gene Location: 46638-49181 bp Feature: domain Description: SIR2_2 Location: 47058-47484 bp Feature: domain Description: SIR2_2 Location: 47058-47484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CAP_bacterial (cd05379), RVT-GII, GIIM (pfam08388), SpaA (pfam17802), LPXTG_anchor (TIGR01167), SIR2_2 (pfam13289)