myRT

myRT report for GCA_003477655.1_ASM347765v1

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Seq: QUDT01000021.1 Firmicutes bacterium AF36-19BH AF36-19BH.Scaf21, whole genome shotgun sequence (58889 bp)
Overview 1 RT 1: 74-2589 bp Neighborhood of RT #1 [74, 2589] RVT-GII GIIM Feature: gene Location: 74-1468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392-1016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392-1 01 6 bp Feature: domain Description: GIIM Note: maturase Location: 1073-1289 bp Feature: domain Description: GIIM Note: maturase Location: 1 073-1 289 bp Feature: gene Location: 1578-2093 bp Feature: gene Location: 2365-2589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QUDT01000025.1 Firmicutes bacterium AF36-19BH AF36-19BH.Scaf25, whole genome shotgun sequence (41409 bp)
Overview 1 RT 1: 10707-13747 bp Neighborhood of RT #1 [10707, 13747] Ere-like HTH_XRE RVT-GII GIIM Feature: gene Location: 10707-11234 bp Feature: domain Description: Ere-like Location: 10824-11187 bp Feature: domain Description: Ere-like Location: 1082 4-11187 bp Feature: gene Location: 11350-11709 bp Feature: domain Description: HTH_XRE Location: 11521-11692 bp Feature: domain Description: HTH_XRE Location: 1152 1-11692 bp Feature: gene Location: 11952-13250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12207-12897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 07-12 897 bp Feature: domain Description: GIIM Note: maturase Location: 12960-13179 bp Feature: domain Description: GIIM Note: maturase Location: 12 960-13179 bp Feature: gene Location: 13301-13474 bp Feature: gene Location: 13478-13747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ere-like (cd14728), HTH_XRE (smart00530), RVT-GII, GIIM (pfam08388)

Seq: QUDT01000008.1 Firmicutes bacterium AF36-19BH AF36-19BH.Scaf8, whole genome shotgun sequence (120866 bp)
Overview 1 RT 1: 116441-120425 bp Neighborhood of RT #1 [116441, 120775] DnaG DUF3991 Toprim_2 AAA_25 RVT-GII Feature: gene Location: 116441-118318 bp Feature: domain Description: DnaG Location: 116600-116696 bp Feature: domain Description: DnaG Location: 116600-116696 bp Feature: domain Description: DUF3991 Location: 116783-116990 bp Feature: domain Description: DUF3 991 Location: 116783 -116990 bp Feature: domain Description: Toprim_2 Location: 117014-117281 bp Feature: domain Description: Toprim_2 Location: 117014-117281 bp Feature: domain Description: AAA_25 Location: 117365-117875 bp Feature: domain Description: AAA_25 Location: 1173 65-117875 bp Feature: gene Location: 118317-118937 bp Feature: gene Location: 119480-120775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119735-120425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11973 5-120425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DnaG (COG0358), DUF3991 (pfam13154), Toprim_2 (pfam13155), AAA_25 (pfam13481), RVT-GII