myRT

myRT report for GCA_003477985.1_ASM347798v1

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Seq: QUEK01000039.1 Ruminococcus sp. AF31-16BH AF31-16BH.Scaf39, whole genome shotgun sequence (20356 bp)
Overview 1 RT 1: 7528-11213 bp Neighborhood of RT #1 [7528, 11213] AAA_18 HxlR RVT-GII ManC Feature: gene Location: 7528-8073 bp Feature: domain Description: AAA_18 Location: 7549-7927 bp Feature: domain Description: AAA_1 8 Location: 7549-7927 bp Feature: gene Location: 8153-8521 bp Feature: domain Description: HxlR Location: 8201-8516 bp Feature: domain Description: HxlR Location: 8201 -851 6 bp Feature: gene Location: 8630-10036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9020-9683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9020-9683 bp Feature: gene Location: 10424-10882 bp Feature: domain Description: ManC Location: 10652-10847 bp Feature: domain Description: ManC Location: 1 0652-1 0847 bp Feature: gene Location: 11079-11213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ManC (COG0662), AAA_18 (pfam13238), HxlR (pfam01638), RVT-GII

Seq: QUEK01000052.1 Ruminococcus sp. AF31-16BH AF31-16BH.Scaf52, whole genome shotgun sequence (7328 bp)
Overview 1 RT 1: 1-3554 bp Neighborhood of RT #1 [1, 3685] TIGR04076 RVT-GII GIIM YdiL Feature: gene Location: 1-342 bp Feature: domain Description: TIGR04076 Location: 97-262 bp Feature: domain Description: TIGR04076 Location: 97-2 62 bp Feature: gene Location: 839-2137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1094-1787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1094-1787 bp Feature: domain Description: GIIM Note: maturase Location: 1847-2066 bp Feature: domain Description: GIIM Note: maturase Location: 1847-2 066 bp Feature: gene Location: 2314-2631 bp Feature: gene Location: 2660-3685 bp Feature: domain Description: YdiL Location: 2876-3554 bp Feature: domain Description: YdiL Location: 2 876-3554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR04076 (TIGR04076 family protein), YdiL (COG1266), RVT-GII, GIIM (pfam08388)

Seq: QUEK01000060.1 Ruminococcus sp. AF31-16BH AF31-16BH.Scaf60, whole genome shotgun sequence (1908 bp)
Overview 1 RT 1: 552-1665 bp Neighborhood of RT #1 [552, 1829] RVT-GII GIIM Feature: gene Location: 552-1829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 765-1380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 765-13 80 bp Feature: domain Description: GIIM Note: maturase Location: 1446-1665 bp Feature: domain Description: GIIM Note: maturase Location: 1446-1665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)