myRT

myRT report for GCA_003477995.1_ASM347799v1

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Seq: QUEM01000004.1 Bacteroides sp. OF04-15BH OF04-15BH.Scaf4, whole genome shotgun sequence (164583 bp)
Overview 1 RT 1: 126748-131838 bp Neighborhood of RT #1 [126748, 131838] RVT-UG5 Feature: gene Location: 126748-127050 bp Feature: gene Location: 127331-128056 bp Feature: gene Location: 128128-131025 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 128587-129082 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 28587-1 29082 bp Feature: gene Location: 131053-131691 bp Feature: gene Location: 131707-131838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5

Seq: QUEM01000008.1 Bacteroides sp. OF04-15BH OF04-15BH.Scaf8, whole genome shotgun sequence (135233 bp)
Overview 1 RT 1: 99139-103243 bp Neighborhood of RT #1 [99139, 103263] TraO Bac_Flav_CT_N RVT-GII Intron_maturas2 Bac_Flav_CT_N Bac_Flav_CT_N Feature: gene Location: 99139-99714 bp Feature: domain Description: TraO Location: 99214-99709 bp Feature: domain Description: TraO Location: 992 14-99709 bp Feature: gene Location: 99717-100424 bp Feature: domain Description: Bac_Flav_CT_N Location: 99843-100404 bp Feature: domain Description: Bac_Flav_CT_N Location: 99843-100404 bp Feature: gene Location: 100414-102225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100678-101500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100678-101500 bp Feature: domain Description: Intron_maturas2 Location: 101569-101878 bp Feature: domain Description: Intron_maturas2 Location: 101569-101878 bp Feature: gene Location: 102260-102595 bp Feature: gene Location: 102766-103263 bp Feature: domain Description: Bac_Flav_CT_N Location: 102769-102844 bp Feature: domain Description: Bac_Flav_CT_N Location: 102 769-102 844 bp Feature: domain Description: Bac_Flav_CT_N Location: 102979-103243 bp Feature: domain Description: Bac_Flav_CT_N Location: 102 979-1032 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraO (pfam10626), Bac_Flav_CT_N (TIGR03780), RVT-GII, Intron_maturas2 (pfam01348)

Seq: QUEM01000082.1 Bacteroides sp. OF04-15BH OF04-15BH.Scaf82, whole genome shotgun sequence (2491 bp)
Overview 1 RT 1: 118-2488 bp Neighborhood of RT #1 [118, 2488] RVT-GII Intron_maturas2 Feature: gene Location: 118-1920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382-1204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 82-1204 bp Feature: domain Description: Intron_maturas2 Location: 1366-1582 bp Feature: domain Description: Intron_maturas2 Location: 13 66-1582 bp Feature: gene Location: 2342-2488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: QUEM01000084.1 Bacteroides sp. OF04-15BH OF04-15BH.Scaf84, whole genome shotgun sequence (2474 bp)
Overview 1 RT 1: 687-1962 bp Neighborhood of RT #1 [687, 2354] RVT_N RVT-GII GIIM Feature: gene Location: 687-2354 bp Feature: domain Description: RVT_N Location: 741-984 bp Feature: domain Description: RVT_N Location: 74 1-984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029-1677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029-1677 bp Feature: domain Description: GIIM Note: maturase Location: 1731-1962 bp Feature: domain Description: GIIM Note: maturase Location: 1731-1962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)