myRT

myRT report for GCA_003478035.1_ASM347803v1

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Seq: QUEP01000011.1 Clostridium sp. OF03-18AA OF03-18AA.Scaf11, whole genome shotgun sequence (107338 bp)
Overview 1 RT 1: 54268-58660 bp Neighborhood of RT #1 [54268, 58660] DUF3751 RVT-DGRs Feature: gene Location: 54268-54819 bp Feature: domain Description: DUF3751 Location: 54292-54733 bp Feature: domain Description: DUF3751 Location: 54292-54733 bp Feature: gene Location: 54819-56096 bp Feature: gene Location: 56518-57741 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 56812-57433 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5681 2-57433 bp Feature: gene Location: 57680-57943 bp Feature: gene Location: 58307-58660 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3751 (pfam12571), RVT-DGRs

Seq: QUEP01000017.1 Clostridium sp. OF03-18AA OF03-18AA.Scaf17, whole genome shotgun sequence (60873 bp)
Overview 1 RT 1: 41712-46237 bp Neighborhood of RT #1 [41712, 46269] DUF4315 RVT-GII Intron_maturas2 Spr Feature: gene Location: 41712-41984 bp Feature: domain Description: DUF4315 Location: 41745-41979 bp Feature: domain Description: DUF4315 Location: 41745-41979 bp Feature: gene Location: 42031-42165 bp Feature: gene Location: 42177-43973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42444-43257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 444-432 57 bp Feature: domain Description: Intron_maturas2 Location: 43335-43755 bp Feature: domain Description: Intron_maturas2 Location: 43335-43755 bp Feature: gene Location: 44238-44426 bp Feature: gene Location: 44599-46269 bp Feature: domain Description: Spr Location: 45964-46237 bp Feature: domain Description: Spr Location: 45964-462 37 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4315 (pfam14193), RVT-GII, Intron_maturas2 (pfam01348), Spr (COG0791)

Seq: QUEP01000002.1 Clostridium sp. OF03-18AA OF03-18AA.Scaf2, whole genome shotgun sequence (384333 bp)
Overview 1 RT 1: 338302-343546 bp Neighborhood of RT #1 [338302, 343569] DUF2313 RVT-DGRs Phage_holin_4_1 Feature: gene Location: 338302-339096 bp Feature: domain Description: DUF2313 Location: 338320-338677 bp Feature: domain Description: DUF23 13 Location: 3 3 83 20-3 3 8677 bp Feature: gene Location: 339111-340916 bp Feature: gene Location: 341201-342493 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 341507-342209 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 41507-3 42209 bp Feature: gene Location: 342735-342869 bp Feature: gene Location: 343147-343569 bp Feature: domain Description: Phage_holin_4_1 Location: 343192-343546 bp Feature: domain Description: Phage_holin_4_1 Location: 3 43 192-3 43 546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2313 (pfam10076), RVT-DGRs, Phage_holin_4_1 (pfam05105)

Seq: QUEP01000034.1 Clostridium sp. OF03-18AA OF03-18AA.Scaf34, whole genome shotgun sequence (2790 bp)
Overview 1 RT 1: 207-2531 bp Neighborhood of RT #1 [207, 2689] RVT-GII HNHc Feature: gene Location: 207-422 bp Feature: gene Location: 731-2689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1067-1811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1067-1811 bp Feature: domain Description: HNHc Note: nucleases Location: 2390-2531 bp Feature: domain Description: HNHc Note: nucleases Location: 2390-2531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: QUEP01000006.1 Clostridium sp. OF03-18AA OF03-18AA.Scaf6, whole genome shotgun sequence (236526 bp)
Overview 1 RT 1: 112230-117683 bp Neighborhood of RT #1 [112230, 117683] Tail_P2_I DUF3751 RVT-DGRs Phage_XkdX Feature: gene Location: 112230-113135 bp Feature: domain Description: Tail_P2_I Location: 112311-112686 bp Feature: domain Description: Tail_P2_I Location: 112311-112686 bp Feature: gene Location: 113140-115086 bp Feature: domain Description: DUF3751 Location: 113164-113617 bp Feature: domain Description: DUF375 1 Location: 113164-113617 bp Feature: gene Location: 115500-116654 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 115761-116400 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 115 761-116400 bp Feature: gene Location: 117002-117163 bp Feature: domain Description: Phage_XkdX Location: 117008-117113 bp Feature: domain Description: Phage_XkdX Location: 117008-117113 bp Feature: gene Location: 117309-117683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tail_P2_I (pfam09684), DUF3751 (pfam12571), RVT-DGRs, Phage_XkdX (pfam09693)