myRT

myRT report for GCA_003478475.1_ASM347847v1

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Seq: QUFF01000011.1 Clostridiaceae bacterium AF29-16BH AF29-16BH.Scaf11, whole genome shotgun sequence (102724 bp)
Overview 1 RT 1: 32600-40423 bp Neighborhood of RT #1 [32600, 40437] TPR AbiH RVT-UG24 AAA-ATPase_like PDDEXK_9 Feature: gene Location: 32600-33817 bp Feature: domain Description: TPR Location: 33365-33587 bp Feature: domain Description: TPR Location: 33365-33587 bp Feature: gene Location: 34189-34644 bp Feature: domain Description: AbiH Location: 34207-34525 bp Feature: domain Description: AbiH Location: 34207-34525 bp Feature: gene Location: 34860-38105 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 35385-35826 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 35385-35826 bp Feature: gene Location: 38089-38589 bp Feature: gene Location: 38734-40437 bp Feature: domain Description: AAA-ATPase_like Location: 38758-39643 bp Feature: domain Description: AAA-ATPase_like Location: 38758-39643 bp Feature: domain Description: PDDEXK_9 Location: 40123-40423 bp Feature: domain Description: PDDEXK_9 Location: 401 23-40423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), AbiH (pfam14253), RVT-UG24, AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011)

Seq: QUFF01000005.1 Clostridiaceae bacterium AF29-16BH AF29-16BH.Scaf5, whole genome shotgun sequence (198485 bp)
Overview 1 RT 1: 53182-57694 bp Neighborhood of RT #1 [53182, 57705] CcmA NosY RVT-GII GIIM ZnuB Feature: gene Location: 53182-54105 bp Feature: domain Description: CcmA Location: 53194-54085 bp Feature: domain Description: CcmA Location: 53194-54085 bp Feature: gene Location: 54098-54805 bp Feature: domain Description: NosY Location: 54131-54680 bp Feature: domain Description: NosY Location: 54131-54680 bp Feature: gene Location: 55462-56124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55501-55666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55501-55666 bp Feature: domain Description: GIIM Note: maturase Location: 55726-55945 bp Feature: domain Description: GIIM Note: maturase Location: 5572 6-55945 bp Feature: gene Location: 56228-56857 bp Feature: gene Location: 56854-57705 bp Feature: domain Description: ZnuB Location: 56878-57694 bp Feature: domain Description: ZnuB Location: 56878-57694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CcmA (COG4133), NosY (COG1277), RVT-GII, GIIM (pfam08388), ZnuB (COG1108)