myRT

myRT report for GCA_003478605.1_ASM347860v1

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Seq: QUFS01000024.1 Ruminococcus sp. AF24-32LB AF24-32LB.Scaf24, whole genome shotgun sequence (63831 bp)
Overview 1 RT 1: 52607-56316 bp Neighborhood of RT #1 [52607, 56366] RutF RVT-GII GIIM InsQ Feature: gene Location: 52607-53119 bp Feature: domain Description: RutF Location: 52622-52943 bp Feature: domain Description: RutF Location: 52622-52943 bp Feature: gene Location: 53446-53673 bp Feature: gene Location: 54104-55381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54317-54932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5431 7-54932 bp Feature: domain Description: GIIM Note: maturase Location: 54998-55217 bp Feature: domain Description: GIIM Note: maturase Location: 54998-5521 7 bp Feature: gene Location: 55685-55957 bp Feature: gene Location: 55977-56366 bp Feature: domain Description: InsQ Location: 55992-56316 bp Feature: domain Description: InsQ Location: 55992-5631 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RutF (TIGR03615), RVT-GII, GIIM (pfam08388), InsQ (COG0675)

Seq: QUFS01000040.1 Ruminococcus sp. AF24-32LB AF24-32LB.Scaf40, whole genome shotgun sequence (23899 bp)
Overview 1 RT 1: 20685-22889 bp Neighborhood of RT #1 [20685, 23632] RVT-UG12 Feature: gene Location: 20685-20861 bp Feature: gene Location: 20915-21781 bp Feature: gene Location: 21935-23632 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 22469-22889 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2 2 469-2 2 889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12

Seq: QUFS01000041.1 Ruminococcus sp. AF24-32LB AF24-32LB.Scaf41, whole genome shotgun sequence (23812 bp)
Overview 1 RT 1: 7994-11678 bp Neighborhood of RT #1 [7994, 11680] AAA_18 HxlR RVT-GII ManC SalY Feature: gene Location: 7994-8539 bp Feature: domain Description: AAA_18 Location: 8015-8393 bp Feature: domain Description: AAA_18 Location: 8015-83 93 bp Feature: gene Location: 8619-8987 bp Feature: domain Description: HxlR Location: 8667-8982 bp Feature: domain Description: HxlR Location: 8667-8982 bp Feature: gene Location: 9096-10502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9486-10149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9486-10149 bp Feature: gene Location: 10890-11348 bp Feature: domain Description: ManC Location: 11118-11313 bp Feature: domain Description: ManC Location: 11118-113 13 bp Feature: gene Location: 11450-11680 bp Feature: domain Description: SalY Location: 11477-11678 bp Feature: domain Description: SalY Location: 11477-11678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_18 (pfam13238), HxlR (pfam01638), RVT-GII, ManC (COG0662), SalY (COG0577)