myRT

myRT report for GCA_003478775.1_ASM347877v1

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Seq: QUGC01000148.1 Ruminococcus sp. AF21-3 AF21-3.Scaf148, whole genome shotgun sequence (3164 bp)
Overview 1 RT 1: 2-2710 bp Neighborhood of RT #1 [2, 3162] RVT-GII GIIM RVT-GII GIIM FRG FRG Feature: gene Location: 2-241 bp Feature: gene Location: 574-1044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 580-760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 580-760 bp Feature: domain Description: GIIM Note: maturase Location: 841-1042 bp Feature: domain Description: GIIM Note: maturase Location: 841 -1 042 bp Feature: gene Location: 1110-2291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1239-1896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 239-1 896 bp Feature: domain Description: GIIM Note: maturase Location: 1980-2193 bp Feature: domain Description: GIIM Note: maturase Location: 1 980-21 93 bp Feature: gene Location: 2371-3162 bp Feature: domain Description: FRG Location: 2404-2479 bp Feature: domain Description: FRG Location: 2404-2479 bp Feature: domain Description: FRG Location: 2482-2710 bp Feature: domain Description: FRG Location: 2482-271 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), FRG (smart00901)

Seq: QUGC01000060.1 Ruminococcus sp. AF21-3 AF21-3.Scaf60, whole genome shotgun sequence (23641 bp)
Overview 1 RT 1: 7851-11346 bp Neighborhood of RT #1 [7851, 11348] AAA_18 HxlR RVT-GII ManC SalY Feature: gene Location: 7851-8207 bp Feature: domain Description: AAA_18 Location: 7872-8154 bp Feature: domain Description: AAA_18 Location: 7872 -8154 bp Feature: gene Location: 8287-8655 bp Feature: domain Description: HxlR Location: 8335-8650 bp Feature: domain Description: HxlR Location: 8335-8650 bp Feature: gene Location: 8764-10170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9154-9817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9154-9817 bp Feature: gene Location: 10558-11016 bp Feature: domain Description: ManC Location: 10786-10981 bp Feature: domain Description: ManC Location: 10786-10981 bp Feature: gene Location: 11118-11348 bp Feature: domain Description: SalY Location: 11145-11346 bp Feature: domain Description: SalY Location: 11145-11346 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_18 (pfam13238), HxlR (pfam01638), RVT-GII, ManC (COG0662), SalY (COG0577)

Seq: QUGC01000008.1 Ruminococcus sp. AF21-3 AF21-3.Scaf8, whole genome shotgun sequence (80551 bp)
Overview 1 RT 1: 146-1894 bp Neighborhood of RT #1 [146, 1977] RVT-UNC SnoaL_2 nicotinamidase_related Feature: gene Location: 146-1033 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 638-1019 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 63 8-1019 bp Feature: gene Location: 1080-1445 bp Feature: domain Description: SnoaL_2 Location: 1095-1392 bp Feature: domain Description: SnoaL_2 Location: 1095-13 92 bp Feature: gene Location: 1453-1977 bp Feature: domain Description: nicotinamidase_related Location: 1459-1894 bp Feature: domain Description: nicotinamidase_related Location: 1459-1894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8/RVT-UG15/RVT-UG12/RVT-UG7(RVT-UNC), SnoaL_2 (pfam12680), nicotinamidase_related (cd01014)