myRT

myRT report for GCA_003478905.1_ASM347890v1

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Seq: QUFY01000024.1 Butyricicoccus sp. AF22-28AC AF22-28AC.Scaf24, whole genome shotgun sequence (48699 bp)
Overview 1 RT 1: 329-5138 bp Neighborhood of RT #1 [329, 5413] RVT-GII GIIM TnpV T4SS-DNA_transf SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 Feature: gene Location: 329-1612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 539-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 539-1 1 54 bp Feature: domain Description: GIIM Note: maturase Location: 1214-1430 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 4-1 430 bp Feature: gene Location: 2142-2486 bp Feature: domain Description: TnpV Location: 2154-2478 bp Feature: domain Description: TnpV Location: 21 54-2478 bp Feature: gene Location: 2483-5413 bp Feature: domain Description: T4SS-DNA_transf Location: 2894-3392 bp Feature: domain Description: T4SS-DNA_transf Location: 2894-3392 bp Feature: domain Description: SR_TndX_transposase Location: 3551-3980 bp Feature: domain Description: SR_TndX_transposase Location: 3551 -3980 bp Feature: domain Description: Recombinase Location: 4076-4436 bp Feature: domain Description: Recombinase Location: 4076-4436 bp Feature: domain Description: Zn_ribbon_recom Location: 4481-4667 bp Feature: domain Description: Zn_ribbon_recom Location: 4481 -4667 bp Feature: domain Description: DUF4368 Location: 4943-5138 bp Feature: domain Description: DUF4368 Location: 4943-51 38 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpV (pfam14198), T4SS-DNA_transf (pfam02534), SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287), RVT-GII, GIIM (pfam08388)

Seq: QUFY01000009.1 Butyricicoccus sp. AF22-28AC AF22-28AC.Scaf9, whole genome shotgun sequence (96209 bp)
Overview 1 RT 1: 10040-16211 bp Neighborhood of RT #1 [10040, 16211] PrgI VirB4_CagE TraC-F-type RVT-GII RVT-GII TraC-F-type Feature: gene Location: 10040-10420 bp Feature: domain Description: PrgI Location: 10055-10328 bp Feature: domain Description: PrgI Location: 10055-1032 8 bp Feature: gene Location: 10389-12401 bp Feature: domain Description: VirB4_CagE Location: 10527-10971 bp Feature: domain Description: VirB4_CagE Location: 1052 7-10971 bp Feature: domain Description: TraC-F-type Location: 11238-12348 bp Feature: domain Description: TraC-F-type Location: 112 38-12 348 bp Feature: gene Location: 13110-13862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13428-13827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1342 8-1382 7 bp Feature: gene Location: 13928-14992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13940-14129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13940-1412 9 bp Feature: gene Location: 15170-15553 bp Feature: domain Description: TraC-F-type Location: 15176-15437 bp Feature: domain Description: TraC-F-type Location: 15176-15437 bp Feature: gene Location: 15570-16211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PrgI (pfam12666), VirB4_CagE (TIGR00929), TraC-F-type (TIGR02746), RVT-GII