myRT

myRT report for GCA_003478915.1_ASM347891v1

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Seq: QUFO01000002.1 Roseburia sp. AF25-13LB AF25-13LB.Scaf2, whole genome shotgun sequence (428268 bp)
Overview 1 RT 1: 120916-124308 bp Neighborhood of RT #1 [120916, 124415] FGE-sulfatase Avd_like RVT-DGRs DUF16 Feature: gene Location: 120916-121968 bp Feature: domain Description: FGE-sulfatase Location: 121153-121480 bp Feature: domain Description: FGE-sulfatase Location: 1 21 1 53-1 21 480 bp Feature: gene Location: 122121-122456 bp Feature: domain Description: Avd_like Location: 122139-122445 bp Feature: domain Description: Avd_like Location: 1 221 39-1 22445 bp Feature: gene Location: 122482-123846 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 122947-123610 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 22947-1 2361 0 bp Feature: gene Location: 123854-124066 bp Feature: gene Location: 124107-124415 bp Feature: domain Description: DUF16 Location: 124122-124308 bp Feature: domain Description: DUF1 6 Location: 1 241 22-1 24308 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FGE-sulfatase (pfam03781), Avd_like (cd16376), RVT-DGRs, DUF16 (pfam01519)

Seq: QUFO01000028.1 Roseburia sp. AF25-13LB AF25-13LB.Scaf28, whole genome shotgun sequence (1876 bp)
Overview 1 RT 1: 92-1685 bp Neighborhood of RT #1 [92, 1685] RVT-GII Feature: gene Location: 92-1387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-1037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-1037 bp Feature: gene Location: 1440-1685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QUFO01000009.1 Roseburia sp. AF25-13LB AF25-13LB.Scaf9, whole genome shotgun sequence (137183 bp)
Overview 1 RT 1: 35319-39520 bp Neighborhood of RT #1 [35319, 39520] LPD26 SpoVG RVT-GII Intron_maturas2 HNHc Feature: gene Location: 35319-36050 bp Feature: domain Description: LPD26 Location: 35349-35421 bp Feature: domain Description: LPD26 Location: 3 53 49-3 5421 bp Feature: domain Description: SpoVG Location: 35670-35901 bp Feature: domain Description: SpoVG Location: 3 5670-3 5901 bp Feature: gene Location: 36069-36344 bp Feature: gene Location: 36444-38276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36708-37539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 6708-3 753 9 bp Feature: domain Description: Intron_maturas2 Location: 37611-37926 bp Feature: domain Description: Intron_maturas2 Location: 3 7611-3 7926 bp Feature: domain Description: HNHc Note: nucleases Location: 38073-38247 bp Feature: domain Description: HNHc Note: nucleases Location: 3 8073 -3 8247 bp Feature: gene Location: 38522-38737 bp Feature: gene Location: 38852-39520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LPD26 (pfam18842), SpoVG (pfam04026), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)