myRT

myRT report for GCA_003479025.1_ASM347902v1

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Seq: QUGJ01000001.1 Blautia sp. AF19-34 AF19-34.Scaf1, whole genome shotgun sequence (485088 bp)
Overview 1 RT 1: 187505-191824 bp 2 RT 2: 477474-483161 bp Neighborhood of RT #1 [187505, 191913] RVT-DGRs ABC_trans_CmpB Neighborhood of RT #2 [477474, 483247] DUF3841 RVT-GII GIIM DEXSc_Pif1_like PRK13889 Feature: gene Location: 187505-189181 bp Feature: gene Location: 189258-189443 bp Feature: gene Location: 189556-190812 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 189847-190438 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 89847-1 90438 bp Feature: gene Location: 190772-191470 bp Feature: gene Location: 191470-191913 bp Feature: domain Description: ABC_trans_CmpB Location: 191563-191824 bp Feature: domain Description: ABC_trans_CmpB Location: 1 91 563-1 91 824 bp Feature: gene Location: 477474-477668 bp Feature: gene Location: 477665-477967 bp Feature: domain Description: DUF3841 Location: 477677-477929 bp Feature: domain Description: DUF3841 Location: 477677-477929 bp Feature: gene Location: 478604-479908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 478904-479525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 478904-479525 bp Feature: domain Description: GIIM Note: maturase Location: 479597-479819 bp Feature: domain Description: GIIM Note: maturase Location: 479597-47981 9 bp Feature: gene Location: 480578-481525 bp Feature: gene Location: 481592-483247 bp Feature: domain Description: DEXSc_Pif1_like Location: 482126-482534 bp Feature: domain Description: DEXSc_Pif1 _like Location: 4821 26-482534 bp Feature: domain Description: PRK13889 Location: 482879-483161 bp Feature: domain Description: PRK1 3889 Location: 482879-4831 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, ABC_trans_CmpB (pfam06541), DUF3841 (pfam12952), RVT-GII, GIIM (pfam08388), DEXSc_Pif1_like (cd18037), PRK13889 (conjugal transfer relaxase TraA; Provisional)

Seq: QUGJ01000011.1 Blautia sp. AF19-34 AF19-34.Scaf11, whole genome shotgun sequence (124895 bp)
Overview 1 RT 1: 13751-19632 bp Neighborhood of RT #1 [13751, 19637] IlvD RVT-GII GIIM Acyl_transf_3 YhcF Feature: gene Location: 13751-15496 bp Feature: domain Description: IlvD Location: 13766-15491 bp Feature: domain Description: IlvD Location: 13766-15491 bp Feature: gene Location: 15674-16048 bp Feature: gene Location: 16120-17652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16435-17059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16435-17059 bp Feature: domain Description: GIIM Note: maturase Location: 17116-17332 bp Feature: domain Description: GIIM Note: maturase Location: 17116-17332 bp Feature: gene Location: 17780-18946 bp Feature: domain Description: Acyl_transf_3 Location: 17879-18872 bp Feature: domain Description: Acyl_transf_3 Location: 17879-18872 bp Feature: gene Location: 19266-19637 bp Feature: domain Description: YhcF Location: 19278-19632 bp Feature: domain Description: YhcF Location: 192 78-19632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IlvD (COG0129), RVT-GII, GIIM (pfam08388), Acyl_transf_3 (pfam01757), YhcF (COG1725)

Seq: QUGJ01000015.1 Blautia sp. AF19-34 AF19-34.Scaf15, whole genome shotgun sequence (104790 bp)
Overview 1 RT 1: 75709-80415 bp Neighborhood of RT #1 [75709, 80501] PBECR4 RVT-GII GIIM YodL LPD18 DUF4316 Feature: gene Location: 75709-76329 bp Feature: domain Description: PBECR4 Location: 75745-76267 bp Feature: domain Description: PBECR4 Location: 75745-76267 bp Feature: gene Location: 76422-77597 bp Feature: gene Location: 77786-79075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78077-78710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78077-78710 bp Feature: domain Description: GIIM Note: maturase Location: 78791-79016 bp Feature: domain Description: GIIM Note: maturase Location: 78791-79016 bp Feature: gene Location: 79167-79367 bp Feature: gene Location: 79650-80501 bp Feature: domain Description: YodL Location: 79665-79962 bp Feature: domain Description: YodL Location: 79665-79962 bp Feature: domain Description: LPD18 Location: 79992-80232 bp Feature: domain Description: LPD18 Location: 79992-8023 2 bp Feature: domain Description: DUF4316 Location: 80286-80415 bp Feature: domain Description: DUF43 16 Location: 80286-80415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBECR4 (pfam18813), RVT-GII, GIIM (pfam08388), YodL (pfam14191), LPD18 (pfam18832), DUF4316 (pfam14195)

Seq: QUGJ01000003.1 Blautia sp. AF19-34 AF19-34.Scaf3, whole genome shotgun sequence (309554 bp)
Overview 1 RT 1: 302773-307859 bp Neighborhood of RT #1 [302773, 307859] DUF3801 T4SS-DNA_transf RVT-GII RVT-GII Feature: gene Location: 302773-303291 bp Feature: domain Description: DUF3801 Location: 302827-303271 bp Feature: domain Description: DUF3801 Location: 302827-303271 bp Feature: gene Location: 303288-304160 bp Feature: domain Description: T4SS-DNA_transf Location: 303738-304095 bp Feature: domain Description: T4 SS-DNA_transf Location: 303738-304 095 bp Feature: gene Location: 304786-305385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305116-305383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305116-305383 bp Feature: gene Location: 305389-306696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305398-305860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305398-305860 bp Feature: gene Location: 306853-307071 bp Feature: gene Location: 307731-307859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), T4SS-DNA_transf (pfam02534), RVT-GII

Seq: QUGJ01000005.1 Blautia sp. AF19-34 AF19-34.Scaf5, whole genome shotgun sequence (220680 bp)
Overview 1 RT 1: 209540-212744 bp Neighborhood of RT #1 [209540, 212752] RVT-DGRs Phage_XkdX Feature: gene Location: 209540-210817 bp Feature: gene Location: 210914-211048 bp Feature: gene Location: 211201-212364 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 211414-212041 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 211414-212041 bp Feature: gene Location: 212390-212587 bp Feature: gene Location: 212603-212752 bp Feature: domain Description: Phage_XkdX Location: 212609-212744 bp Feature: domain Description: Phage_XkdX Location: 212609-212744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_XkdX (pfam09693)

Seq: QUGJ01000006.1 Blautia sp. AF19-34 AF19-34.Scaf6, whole genome shotgun sequence (204159 bp)
Overview 1 RT 1: 102096-105111 bp Neighborhood of RT #1 [102096, 105111] RVT-GII GIIM RVT-GII GIIM DUF5372 Feature: gene Location: 102096-102242 bp Feature: gene Location: 102785-102949 bp Feature: gene Location: 102998-103522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103001-103142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103001-103142 bp Feature: domain Description: GIIM Note: maturase Location: 103193-103424 bp Feature: domain Description: GIIM Note: maturase Location: 103193-103424 bp Feature: gene Location: 103602-104315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103605-103932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1036 05-103932 bp Feature: domain Description: GIIM Note: maturase Location: 104013-104241 bp Feature: domain Description: GIIM Note: maturase Location: 104013-104241 bp Feature: gene Location: 104365-104694 bp Feature: domain Description: DUF5372 Location: 104476-104638 bp Feature: domain Description: DUF5372 Location: 104476 -1046 38 bp Feature: gene Location: 104752-105111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF5372 (pfam17342)

Seq: QUGJ01000009.1 Blautia sp. AF19-34 AF19-34.Scaf9, whole genome shotgun sequence (130152 bp)
Overview 1 RT 1: 102800-120213 bp Neighborhood of RT #1 [102800, 120425] ArdC YodL DUF3849 LPD18 LPD16 LPD16 RVT_N RVT-GII YkfC YtxK COG4646 PRK07726 Feature: gene Location: 102800-107680 bp Feature: domain Description: ArdC Location: 103025-103616 bp Feature: domain Description: ArdC Location: 103025-103616 bp Feature: domain Description: YodL Location: 104843-105134 bp Feature: domain Description: YodL Location: 104843-105134 bp Feature: domain Description: DUF3849 Location: 105191-105566 bp Feature: domain Description: DUF3849 Location: 105191-105566 bp Feature: domain Description: LPD18 Location: 105605-105845 bp Feature: domain Description: LPD18 Location: 105605-105845 bp Feature: domain Description: LPD16 Location: 105881-106115 bp Feature: domain Description: LPD16 Location: 105881-106115 bp Feature: domain Description: LPD16 Location: 106238-106439 bp Feature: domain Description: LPD16 Location: 106238-106439 bp Feature: gene Location: 107721-108779 bp Feature: gene Location: 108780-110450 bp Feature: RT Description: RVT_N Location: 108825-109068 bp Feature: RT Description: RVT_N Location: 108825-109068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109113-109761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109113-1097 61 bp Feature: domain Description: YkfC Location: 109869-110064 bp Feature: domain Description: YkfC Location: 109869-110064 bp Feature: gene Location: 111029-118240 bp Feature: domain Description: YtxK Location: 114713-115115 bp Feature: domain Description: YtxK Location: 1147 13-115115 bp Feature: domain Description: COG4646 Location: 115184-117743 bp Feature: domain Description: COG4646 Location: 115184-117 7 43 bp Feature: gene Location: 118260-120425 bp Feature: domain Description: PRK07726 Location: 118344-120213 bp Feature: domain Description: PRK07 7 26 Location: 118344-120213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), YodL (pfam14191), DUF3849 (pfam12960), LPD18 (pfam18832), LPD16 (pfam18830), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class )
PRK07726 (DNA topoisomerase 3)