myRT

myRT report for GCA_003479825.1_ASM347982v1

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Seq: QUHW01000002.1 Tannerella sp. AF04-6 AF04-6.Scaf2, whole genome shotgun sequence (135046 bp)
Overview 1 RT 1: 3-2882 bp Neighborhood of RT #1 [3, 2882] RVT-GII GIIM Feature: gene Location: 3-200 bp Feature: gene Location: 212-376 bp Feature: gene Location: 609-1904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 804-1419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 804-1 41 9 bp Feature: domain Description: GIIM Note: maturase Location: 1491-1704 bp Feature: domain Description: GIIM Note: maturase Location: 1 491 -1 704 bp Feature: gene Location: 2187-2429 bp Feature: gene Location: 2475-2882 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QUHW01000088.1 Tannerella sp. AF04-6 AF04-6.Scaf88, whole genome shotgun sequence (8937 bp)
Overview 1 RT 1: 121-6777 bp Neighborhood of RT #1 [121, 7160] RVT_N RVT-GII GIIM N6_Mtase COG4646 Feature: gene Location: 121-1788 bp Feature: RT Description: RVT_N Location: 175-418 bp Feature: RT Description: RVT_N Location: 175-418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1111 bp Feature: domain Description: GIIM Note: maturase Location: 1165-1396 bp Feature: domain Description: GIIM Note: maturase Location: 1165-1396 bp Feature: gene Location: 1770-2084 bp Feature: gene Location: 2445-7160 bp Feature: domain Description: N6_Mtase Location: 2757-3357 bp Feature: domain Description: N6_Mtase Location: 2 757-3357 bp Feature: domain Description: COG4646 Location: 4767-6777 bp Feature: domain Description: COG4646 Location: 4767-6777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )