myRT

myRT report for GCA_003479885.1_ASM347988v1

Download annotations/find similar RTs

Seq: QUHZ01000001.1 Blautia sp. AM46-5 AM46-5.Scaf1, whole genome shotgun sequence (202782 bp)
Overview 1 RT 1: 38480-43938 bp Neighborhood of RT #1 [38480, 43943] DUF3801 VirD4 VirD4 RVT-GII TraG-D_C Maff2 Feature: gene Location: 38480-38971 bp Feature: domain Description: DUF3801 Location: 38546-38939 bp Feature: domain Description: DUF3801 Location: 38546-38939 bp Feature: gene Location: 38968-39873 bp Feature: domain Description: VirD4 Location: 39241-39595 bp Feature: domain Description: VirD4 Location: 39241 -39595 bp Feature: domain Description: VirD4 Location: 39682-39835 bp Feature: domain Description: VirD4 Location: 39682-39835 bp Feature: gene Location: 40532-42403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40862-41606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40862-41 606 bp Feature: gene Location: 42584-43606 bp Feature: domain Description: TraG-D_C Location: 43052-43406 bp Feature: domain Description: TraG-D_C Location: 43052-43406 bp Feature: gene Location: 43728-43943 bp Feature: domain Description: Maff2 Location: 43731-43938 bp Feature: domain Description: Maff2 Location: 43731 -43938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), VirD4 (COG3505), RVT-GII, TraG-D_C (pfam12696), Maff2 (pfam12750)

Seq: QUHZ01000002.1 Blautia sp. AM46-5 AM46-5.Scaf2, whole genome shotgun sequence (198808 bp)
Overview 1 RT 1: 82420-85631 bp Neighborhood of RT #1 [82420, 85631] Phage_XkdX RVT-DGRs Feature: gene Location: 82420-82569 bp Feature: domain Description: Phage_XkdX Location: 82426-82561 bp Feature: domain Description: Phage_XkdX Location: 82 42 6-82 561 bp Feature: gene Location: 82585-82782 bp Feature: gene Location: 82808-83971 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 83021-83648 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8302 1-83648 bp Feature: gene Location: 84124-84258 bp Feature: gene Location: 84354-85631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs

Seq: QUHZ01000022.1 Blautia sp. AM46-5 AM46-5.Scaf22, whole genome shotgun sequence (59552 bp)
Overview 1 RT 1: 13413-18651 bp Neighborhood of RT #1 [13413, 18764] TED SpaA SpaA SpaA RVT-GII MFS_1 Feature: gene Location: 13413-14141 bp Feature: gene Location: 14219-16090 bp Feature: domain Description: TED Location: 14519-14855 bp Feature: domain Description: TED Location: 14519-14855 bp Feature: domain Description: SpaA Location: 15263-15386 bp Feature: domain Description: SpaA Location: 15263 -153 86 bp Feature: domain Description: SpaA Location: 15500-15683 bp Feature: domain Description: SpaA Location: 15500-15683 bp Feature: domain Description: SpaA Location: 15797-15971 bp Feature: domain Description: SpaA Location: 15797-15971 bp Feature: gene Location: 16657-17241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16924-17107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16924-17107 bp Feature: gene Location: 17162-17557 bp Feature: gene Location: 17649-18764 bp Feature: domain Description: MFS_1 Location: 17760-18651 bp Feature: domain Description: MFS_1 Location: 17760-18651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TED (pfam08341), SpaA (pfam17802), RVT-GII, MFS_1 (pfam07690)