myRT

myRT report for GCA_003480245.1_ASM348024v1

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Seq: QUIM01000001.1 Blautia sp. AM42-2 AM42-2.Scaf1, whole genome shotgun sequence (661372 bp)
Overview 1 RT 1: 19017-22179 bp Neighborhood of RT #1 [19017, 22205] RVT-UNC RVT-GII Nitroreductase_3 MATE_like_4 Feature: gene Location: 19017-19550 bp Feature: gene Location: 19746-20108 bp Feature: domain Description: RVT-UNC Note: UNC RT Location: 19842-20076 bp Feature: domain Description: RVT-UNC Note: UNC RT Location: 1 9842-20076 bp Feature: gene Location: 20309-20467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20327-20429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20327-20429 bp Feature: gene Location: 20657-20878 bp Feature: domain Description: Nitroreductase_3 Location: 20690-20783 bp Feature: domain Description: Nitroreductase_3 Location: 20690-20783 bp Feature: gene Location: 20865-22205 bp Feature: domain Description: MATE_like_4 Location: 20886-22179 bp Feature: domain Description: MATE_like_4 Location: 20886-221 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT B3/B4(RVT-UNC), RVT-GII, Nitroreductase_3, MATE_like_4 (cd13144)

Seq: QUIM01000015.1 Blautia sp. AM42-2 AM42-2.Scaf15, whole genome shotgun sequence (78230 bp)
Overview 1 RT 1: 72989-75989 bp Neighborhood of RT #1 [72989, 75989] Cas2_I_II_III RVT-CRISPR cas1_HMARI Feature: gene Location: 72989-73267 bp Feature: gene Location: 73403-73663 bp Feature: domain Description: Cas2_I_II_III Location: 73412-73637 bp Feature: domain Description: Cas2 _I_II_III Location: 73412 -73637 bp Feature: gene Location: 73671-75569 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 73878-74460 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 73878-74460 bp Feature: domain Description: cas1_HMARI Location: 74595-75561 bp Feature: domain Description: cas1_HMARI Location: 74595-75561 bp Feature: gene Location: 75581-75715 bp Feature: gene Location: 75849-75989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, cas1_HMARI (TIGR03641)

Seq: QUIM01000026.1 Blautia sp. AM42-2 AM42-2.Scaf26, whole genome shotgun sequence (6050 bp)
Overview 1 RT 1: 3551-5712 bp Neighborhood of RT #1 [3551, 5897] YbbA HxlR RVT-GII Feature: gene Location: 3551-4225 bp Feature: domain Description: YbbA Location: 3722-4217 bp Feature: domain Description: YbbA Location: 3 722-4217 bp Feature: gene Location: 4355-4753 bp Feature: domain Description: HxlR Location: 4427-4724 bp Feature: domain Description: HxlR Location: 4427-4724 bp Feature: gene Location: 4764-5897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5019-5712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5019-5712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbbA (COG4181), HxlR (pfam01638), RVT-GII

Seq: QUIM01000029.1 Blautia sp. AM42-2 AM42-2.Scaf29, whole genome shotgun sequence (5079 bp)
Overview 1 RT 1: 127-4120 bp Neighborhood of RT #1 [127, 4914] RVT-GII GIIM COG3547 PMT_2 Feature: gene Location: 127-1467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412-1105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 12-1105 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1390 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1390 bp Feature: gene Location: 1713-2951 bp Feature: domain Description: COG3547 Location: 1716-2862 bp Feature: domain Description: COG354 7 Location: 1716-2862 bp Feature: gene Location: 3469-4914 bp Feature: domain Description: PMT_2 Location: 3637-4120 bp Feature: domain Description: PMT_2 Location: 3637-4 120 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), PMT_2 (pfam13231)

Seq: QUIM01000032.1 Blautia sp. AM42-2 AM42-2.Scaf32, whole genome shotgun sequence (2144 bp)
Overview 1 RT 1: 553-1843 bp Neighborhood of RT #1 [553, 2061] RVT_N RVT-GII GIIM Feature: gene Location: 553-2061 bp Feature: domain Description: RVT_N Location: 610-853 bp Feature: domain Description: RVT_N Location: 610-85 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 916-1558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 916-15 5 8 bp Feature: domain Description: GIIM Note: maturase Location: 1609-1843 bp Feature: domain Description: GIIM Note: maturase Location: 1609-1843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)