myRT

myRT report for GCA_003480375.1_ASM348037v1

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Seq: QUIY01000018.1 Ruminococcus sp. AM32-17LB AM32-17LB.Scaf18, whole genome shotgun sequence (83768 bp)
Overview 1 RT 1: 1-2386 bp Neighborhood of RT #1 [1, 2460] RVT-GII GIIM group_II_RT_mat GIIM Feature: gene Location: 1-186 bp Feature: gene Location: 192-335 bp Feature: gene Location: 606-1862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-1467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 0-1 467 bp Feature: domain Description: GIIM Note: maturase Location: 1551-1764 bp Feature: domain Description: GIIM Note: maturase Location: 1 551 -1 764 bp Feature: gene Location: 1988-2191 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1997-2186 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 997-21 86 bp Feature: gene Location: 2209-2460 bp Feature: domain Description: GIIM Note: maturase Location: 2221-2386 bp Feature: domain Description: GIIM Note: maturase Location: 2221 -2386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), GIIM (pfam08388), RVT-GII

Seq: QUIY01000005.1 Ruminococcus sp. AM32-17LB AM32-17LB.Scaf5, whole genome shotgun sequence (175996 bp)
Overview 1 RT 1: 33220-39116 bp Neighborhood of RT #1 [33220, 39124] LolD MacB_PCD SalY SalY RVT-GII GIIM RAYT ThiF_MoeB_HesA_family Feature: gene Location: 33220-33969 bp Feature: domain Description: LolD Location: 33310-33955 bp Feature: domain Description: LolD Location: 33310-33955 bp Feature: gene Location: 33966-36419 bp Feature: domain Description: MacB_PCD Location: 34023-34620 bp Feature: domain Description: MacB_PCD Location: 3402 3-3462 0 bp Feature: domain Description: SalY Location: 34755-35169 bp Feature: domain Description: SalY Location: 34755-35169 bp Feature: domain Description: SalY Location: 35745-36399 bp Feature: domain Description: SalY Location: 35745-36399 bp Feature: gene Location: 36416-37531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36419-37028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36419-3702 8 bp Feature: domain Description: GIIM Note: maturase Location: 37082-37313 bp Feature: domain Description: GIIM Note: maturase Location: 37082 -37313 bp Feature: gene Location: 37684-38031 bp Feature: domain Description: RAYT Location: 37690-37954 bp Feature: domain Description: RAYT Location: 37690-37954 bp Feature: gene Location: 38453-39124 bp Feature: domain Description: ThiF_MoeB_HesA_family Location: 38465-39116 bp Feature: domain Description: ThiF_MoeB_HesA_family Location: 38465-39116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LolD (COG1136), MacB_PCD (pfam12704), SalY (COG0577), RVT-GII, GIIM (pfam08388), RAYT (COG1943), ThiF_MoeB_HesA_family (cd00757)

Seq: QUIY01000053.1 Ruminococcus sp. AM32-17LB AM32-17LB.Scaf53, whole genome shotgun sequence (8461 bp)
Overview 1 RT 1: 5915-8108 bp Neighborhood of RT #1 [5915, 8458] MhpC RVT-GII Feature: gene Location: 5915-6517 bp Feature: domain Description: MhpC Location: 6032-6473 bp Feature: domain Description: MhpC Location: 603 2-6473 bp Feature: gene Location: 6552-7019 bp Feature: gene Location: 7217-8458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7418-8108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7418-8108 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), RVT-GII

Seq: QUIY01000057.1 Ruminococcus sp. AM32-17LB AM32-17LB.Scaf57, whole genome shotgun sequence (7341 bp)
Overview 1 RT 1: 3199-7155 bp Neighborhood of RT #1 [3199, 7155] HTH_17 COG1373 RVT-GII Feature: gene Location: 3199-3375 bp Feature: domain Description: HTH_17 Location: 3220-3361 bp Feature: domain Description: HTH_17 Location: 3220-3361 bp Feature: gene Location: 3851-5119 bp Feature: domain Description: COG1373 Location: 3869-5099 bp Feature: domain Description: COG1373 Location: 3869-5099 bp Feature: gene Location: 5497-6756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5716-6406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5716-64 06 bp Feature: gene Location: 6910-7155 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-GII

Seq: QUIY01000079.1 Ruminococcus sp. AM32-17LB AM32-17LB.Scaf79, whole genome shotgun sequence (1278 bp)
Overview 1 RT 1: 2-1275 bp Neighborhood of RT #1 [2, 1275] RVT-GII Feature: gene Location: 2-754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 257-755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 7-75 5 bp Feature: gene Location: 763-1092 bp Feature: gene Location: 1129-1275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII