myRT

myRT report for GCA_003480495.1_ASM348049v1

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Seq: QUJE01000042.1 Ruminococcus sp. AM29-26 AM29-26.Scaf42, whole genome shotgun sequence (23735 bp)
Overview 1 RT 1: 12204-15743 bp Neighborhood of RT #1 [12204, 15889] ManC RVT-GII HxlR AAA_18 Feature: gene Location: 12204-12338 bp Feature: gene Location: 12535-12993 bp Feature: domain Description: ManC Location: 12763-12958 bp Feature: domain Description: ManC Location: 1 2763-1 2958 bp Feature: gene Location: 13381-14787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13771-14434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3771 -1 4434 bp Feature: gene Location: 14896-15264 bp Feature: domain Description: HxlR Location: 14944-15259 bp Feature: domain Description: HxlR Location: 1 4944-1 5259 bp Feature: gene Location: 15344-15889 bp Feature: domain Description: AAA_18 Location: 15365-15743 bp Feature: domain Description: AAA_1 8 Location: 1 5365-1 5743 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ManC (COG0662), RVT-GII, HxlR (pfam01638), AAA_18 (pfam13238)

Seq: QUJE01000083.1 Ruminococcus sp. AM29-26 AM29-26.Scaf83, whole genome shotgun sequence (1853 bp)
Overview 1 RT 1: 80-1850 bp Neighborhood of RT #1 [80, 1850] RVT-GII GIIM Feature: gene Location: 80-1357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 293-908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 93-908 bp Feature: domain Description: GIIM Note: maturase Location: 974-1193 bp Feature: domain Description: GIIM Note: maturase Location: 974-1193 bp Feature: gene Location: 1698-1850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)