myRT

myRT report for GCA_003480675.1_ASM348067v1

Download annotations/find similar RTs

Seq: QUJO01000194.1 Coprobacillus sp. AM28-15LB AM28-15LB.Scaf194, whole genome shotgun sequence (738 bp)
Overview 1 RT 1: 2-734 bp Neighborhood of RT #1 [2, 736] RVT-GII Feature: gene Location: 2-736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QUJO01000039.1 Coprobacillus sp. AM28-15LB AM28-15LB.Scaf39, whole genome shotgun sequence (18865 bp)
Overview 1 RT 1: 201-8749 bp Neighborhood of RT #1 [201, 10200] mycofact_OYE_2 RVT-UG8 RVT-UG3 PHP_HisPPase_AMP AAA_21 AAA_21 TPR_1 Feature: gene Location: 201-1562 bp Feature: domain Description: mycofact_OYE_2 Location: 204-1548 bp Feature: domain Description: mycofact_OYE_2 Location: 2 04-1548 bp Feature: gene Location: 1839-3890 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2403-2844 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 403-2 844 bp Feature: gene Location: 3948-4199 bp Feature: gene Location: 4223-5743 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 4997-5447 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 4997-5447 bp Feature: gene Location: 6038-8539 bp Feature: domain Description: PHP_HisPPase_AMP Location: 6353-6722 bp Feature: domain Description: PHP_HisPPase_AMP Location: 6353-672 2 bp Feature: domain Description: AAA_21 Location: 7094-7163 bp Feature: domain Description: AAA_2 1 Location: 7094-7163 bp Feature: domain Description: AAA_21 Location: 7991-8366 bp Feature: domain Description: AAA_2 1 Location: 7991-8366 bp Feature: gene Location: 8539-10200 bp Feature: domain Description: TPR_1 Location: 8677-8749 bp Feature: domain Description: TPR_1 Location: 8677-8749 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mycofact_OYE_2 (TIGR03997), RVT-UG8, RVT-UG3, PHP_HisPPase_AMP (cd07438), AAA_21 (pfam13304), TPR_1 (pfam00515)

Seq: QUJO01000048.1 Coprobacillus sp. AM28-15LB AM28-15LB.Scaf48, whole genome shotgun sequence (10376 bp)
Overview 1 RT 1: 4642-7651 bp Neighborhood of RT #1 [4642, 7651] RVT-GII GIIM Feature: gene Location: 4642-5049 bp Feature: gene Location: 5095-5298 bp Feature: gene Location: 5629-6924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5824-6439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5824-643 9 bp Feature: domain Description: GIIM Note: maturase Location: 6511-6724 bp Feature: domain Description: GIIM Note: maturase Location: 6511-6724 bp Feature: gene Location: 7157-7321 bp Feature: gene Location: 7454-7651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QUJO01000073.1 Coprobacillus sp. AM28-15LB AM28-15LB.Scaf73, whole genome shotgun sequence (2533 bp)
Overview 1 RT 1: 52-2393 bp Neighborhood of RT #1 [52, 2419] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 52-213 bp Feature: gene Location: 962-1171 bp Feature: gene Location: 1304-2419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1499-1700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 99-1700 bp Feature: domain Description: Intron_maturas2 Location: 1859-2228 bp Feature: domain Description: Intron_maturas2 Location: 1859-2228 bp Feature: domain Description: HNHc Note: nucleases Location: 2252-2393 bp Feature: domain Description: HNHc Note: nucleases Location: 2252-2393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: QUJO01000076.1 Coprobacillus sp. AM28-15LB AM28-15LB.Scaf76, whole genome shotgun sequence (2287 bp)
Overview 1 RT 1: 264-2072 bp Neighborhood of RT #1 [264, 2284] RVT-GII Intron_maturas2 Feature: gene Location: 264-506 bp Feature: gene Location: 1274-2284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1454-1667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145 4-1667 bp Feature: domain Description: Intron_maturas2 Location: 1745-2072 bp Feature: domain Description: Intron_maturas2 Location: 1745 -2072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)