myRT

myRT report for GCA_003480845.1_ASM348084v1

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Seq: QUJZ01000001.1 Blautia sp. TM10-2 TM10-2.Scaf1, whole genome shotgun sequence (372573 bp)
Overview 1 RT 1: 10098-15060 bp Neighborhood of RT #1 [10098, 15060] RVT-DGRs Feature: gene Location: 10098-10553 bp Feature: gene Location: 10651-10899 bp Feature: gene Location: 11336-12532 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11639-12281 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 639-1 2281 bp Feature: gene Location: 12665-12808 bp Feature: gene Location: 12841-15060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: QUJZ01000002.1 Blautia sp. TM10-2 TM10-2.Scaf2, whole genome shotgun sequence (276422 bp)
Overview 1 RT 1: 169353-174640 bp Neighborhood of RT #1 [169353, 174663] Aldose_epim_lacX guaA RVT-UG14 RVT-UG14 HipB Acetyltransf_10 Feature: gene Location: 169353-170258 bp Feature: domain Description: Aldose_epim_lacX Location: 169389-170250 bp Feature: domain Description: Aldose_epim_lacX Location: 169389-1702 50 bp Feature: gene Location: 170418-171962 bp Feature: domain Description: guaA Location: 170424-171960 bp Feature: domain Description: guaA Location: 17042 4-171960 bp Feature: gene Location: 172044-173597 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 172392-172464 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 172 392 -172 464 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 172479-172752 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 172 479-172 752 bp Feature: gene Location: 173587-174165 bp Feature: domain Description: HipB Location: 173596-173818 bp Feature: domain Description: HipB Location: 173596-173818 bp Feature: gene Location: 174190-174663 bp Feature: domain Description: Acetyltransf_10 Location: 174334-174640 bp Feature: domain Description: Acetyltransf_10 Location: 174334-174640 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Aldose_epim_lacX (cd09024), guaA (PRK00074), RVT-UG14, HipB (COG1396), Acetyltransf_10 (pfam13673)

Seq: QUJZ01000007.1 Blautia sp. TM10-2 TM10-2.Scaf7, whole genome shotgun sequence (214342 bp)
Overview 1 RT 1: 196311-205332 bp Neighborhood of RT #1 [196311, 205346] Y1_Tnp InsQ RVT_N RVT-GII GIIM RVT-GII GIIM SpaA SpaA SpaA SpaA TQ TQ LPXTG_anchor Feature: gene Location: 196311-196748 bp Feature: domain Description: Y1_Tnp Location: 196344-196698 bp Feature: domain Description: Y1_Tnp Location: 1963 44-196698 bp Feature: gene Location: 196729-197832 bp Feature: domain Description: InsQ Location: 196738-197809 bp Feature: domain Description: InsQ Location: 19673 8-197809 bp Feature: gene Location: 198852-200360 bp Feature: domain Description: RVT_N Location: 198909-199152 bp Feature: domain Description: RVT_N Location: 198909-199152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 199215-199857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 199215-199857 bp Feature: domain Description: GIIM Note: maturase Location: 199908-200142 bp Feature: domain Description: GIIM Note: maturase Location: 199908-200142 bp Feature: gene Location: 200596-201873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200809-201424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200809-201424 bp Feature: domain Description: GIIM Note: maturase Location: 201490-201712 bp Feature: domain Description: GIIM Note: maturase Location: 201490-201712 bp Feature: gene Location: 201875-202024 bp Feature: gene Location: 202224-205346 bp Feature: domain Description: SpaA Location: 202956-203154 bp Feature: domain Description: SpaA Location: 202956-203 154 bp Feature: domain Description: SpaA Location: 203262-203529 bp Feature: domain Description: SpaA Location: 203 262-203 529 bp Feature: domain Description: SpaA Location: 203721-203964 bp Feature: domain Description: SpaA Location: 203 721-203 964 bp Feature: domain Description: SpaA Location: 204054-204345 bp Feature: domain Description: SpaA Location: 204054-2043 45 bp Feature: domain Description: TQ Location: 204402-204765 bp Feature: domain Description: TQ Location: 204402-204765 bp Feature: domain Description: TQ Location: 204789-205155 bp Feature: domain Description: TQ Location: 204789-205155 bp Feature: domain Description: LPXTG_anchor Location: 205236-205332 bp Feature: domain Description: LPXTG_anchor Location: 20523 6-2053 3 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y1_Tnp (pfam01797), InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), SpaA (pfam17802), TQ (pfam18202), LPXTG_anchor (TIGR01167)