myRT

myRT report for GCA_003480905.1_ASM348090v1

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Seq: QUJK01000001.1 Blautia sp. AM28-27 AM28-27.Scaf1, whole genome shotgun sequence (875372 bp)
Overview 1 RT 1: 427398-432592 bp Neighborhood of RT #1 [427398, 432870] TnpW RVT_N RVT-GII RVT-GII GIIM SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 Feature: gene Location: 427398-427583 bp Feature: domain Description: TnpW Location: 427461-427557 bp Feature: domain Description: TnpW Location: 427461 -427557 bp Feature: gene Location: 427609-427863 bp Feature: gene Location: 428446-429237 bp Feature: domain Description: RVT_N Location: 428491-428734 bp Feature: domain Description: RVT_N Location: 428491 -428734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 428779-429094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 428779-429094 bp Feature: gene Location: 429053-430111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429056-429431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429056-429431 bp Feature: domain Description: GIIM Note: maturase Location: 429482-429716 bp Feature: domain Description: GIIM Note: maturase Location: 429482-42971 6 bp Feature: gene Location: 430255-430674 bp Feature: gene Location: 430987-432870 bp Feature: domain Description: SR_TndX_transposase Location: 431014-431428 bp Feature: domain Description: SR_TndX_transposase Location: 431 01 4-431 428 bp Feature: domain Description: Recombinase Location: 431527-431896 bp Feature: domain Description: Recombinase Location: 431 527-431 896 bp Feature: domain Description: Zn_ribbon_recom Location: 431938-432121 bp Feature: domain Description: Zn_ribbon_recom Location: 431 938-4321 21 bp Feature: domain Description: DUF4368 Location: 432397-432592 bp Feature: domain Description: DUF4368 Location: 432397-432592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpW (pfam14202), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287)

Seq: QUJK01000011.1 Blautia sp. AM28-27 AM28-27.Scaf11, whole genome shotgun sequence (97909 bp)
Overview 1 RT 1: 23512-28015 bp Neighborhood of RT #1 [23512, 28050] LacZ PRK10572 PRK10572 RVT-GII PolyPPase_VTC_like Feature: gene Location: 23512-25230 bp Feature: domain Description: LacZ Location: 23563-24829 bp Feature: domain Description: LacZ Location: 2 3563-2 482 9 bp Feature: gene Location: 25299-26219 bp Feature: domain Description: PRK10572 Location: 25533-25668 bp Feature: domain Description: PRK10572 Location: 2 5533-2 5668 bp Feature: domain Description: PRK10572 Location: 25869-26193 bp Feature: domain Description: PRK10572 Location: 2 5869-2 6193 bp Feature: gene Location: 26339-26830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26633-26822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6633-2 682 2 bp Feature: gene Location: 26847-27134 bp Feature: gene Location: 27355-28050 bp Feature: domain Description: PolyPPase_VTC_like Location: 27373-28015 bp Feature: domain Description: PolyPPase_VTC_like Location: 2 7373-2 8015 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacZ (COG3250), PRK10572 (arabinose operon transcriptional regulator AraC), RVT-GII, PolyPPase_VTC_like (cd07750)

Seq: QUJK01000020.1 Blautia sp. AM28-27 AM28-27.Scaf20, whole genome shotgun sequence (50390 bp)
Overview 1 RT 1: 32775-38574 bp Neighborhood of RT #1 [32775, 38576] ParB_N_like RVT-GII GIIM SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 Feature: gene Location: 32775-33146 bp Feature: gene Location: 33441-34820 bp Feature: domain Description: ParB_N_like Location: 33978-34233 bp Feature: domain Description: ParB_N_like Location: 3 3 978-3 423 3 bp Feature: gene Location: 34937-36226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35228-35861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 5228-3 5861 bp Feature: domain Description: GIIM Note: maturase Location: 35942-36167 bp Feature: domain Description: GIIM Note: maturase Location: 3 5942-3 6167 bp Feature: gene Location: 36468-36722 bp Feature: gene Location: 36954-38576 bp Feature: domain Description: SR_TndX_transposase Location: 36990-37404 bp Feature: domain Description: SR_TndX_transposase Location: 3 6990-3 7404 bp Feature: domain Description: Recombinase Location: 37506-37887 bp Feature: domain Description: Recombinase Location: 3 7506-3 7887 bp Feature: domain Description: Zn_ribbon_recom Location: 37920-38100 bp Feature: domain Description: Zn_ribbon_recom Location: 3 7920-3 8100 bp Feature: domain Description: DUF4368 Location: 38376-38574 bp Feature: domain Description: DUF43 68 Location: 3 83 76-3 8574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParB_N_like (cd16411), RVT-GII, GIIM (pfam08388), SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287)

Seq: QUJK01000003.1 Blautia sp. AM28-27 AM28-27.Scaf3, whole genome shotgun sequence (299897 bp)
Overview 1 RT 1: 12141-18347 bp Neighborhood of RT #1 [12141, 18394] HTH_28 HTH_28 HTH_28 PHA02517 DDE_Tnp_IS66 DDE_Tnp_IS66_C AAAA RVT-GII PHA02517 IstB_IS21 Feature: gene Location: 12141-14879 bp Feature: domain Description: HTH_28 Location: 12174-12309 bp Feature: domain Description: HTH_28 Location: 12174 -12309 bp Feature: domain Description: HTH_28 Location: 12348-12471 bp Feature: domain Description: HTH_28 Location: 1234 8-124 71 bp Feature: domain Description: HTH_28 Location: 12543-12690 bp Feature: domain Description: HTH_28 Location: 1254 3-12690 bp Feature: domain Description: PHA02517 Location: 12921-13704 bp Feature: domain Description: PHA02517 Location: 12921-13704 bp Feature: domain Description: DDE_Tnp_IS66 Location: 13773-14607 bp Feature: domain Description: DDE_Tnp_IS66 Location: 13773-14 607 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 14631-14754 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 14 631-14 754 bp Feature: gene Location: 15139-16536 bp Feature: domain Description: AAAA Location: 15148-16366 bp Feature: domain Description: AAAA Location: 1514 8-16366 bp Feature: gene Location: 17069-17548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17279-17480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17279-174 80 bp Feature: gene Location: 17485-18132 bp Feature: domain Description: PHA02517 Location: 17557-18097 bp Feature: domain Description: PHA02517 Location: 17557-18097 bp Feature: gene Location: 18155-18394 bp Feature: domain Description: IstB_IS21 Location: 18161-18347 bp Feature: domain Description: IstB_IS21 Location: 18161-1834 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_28 (pfam13518), PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), AAAA (COG1672), RVT-GII, IstB_IS21 (pfam01695)